Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 MPS3YJL019W 2049 nt3.92□□□□□ -1.78
SSU72P53538 AIR2YDL175C 1035 nt3.91□□□□□ -1.78
SSU72P53538 PHO13YDL236W 939 nt3.91□□□□□ -1.78
SSU72P53538 DAS2YDR020C 699 nt3.91□□□□□ -1.78
SSU72P53538 COS6YGR295C 1146 nt3.91□□□□□ -1.78
SSU72P53538 PUT1YLR142W 1431 nt3.91□□□□□ -1.78
SSU72P53538 RNA14YMR061W 2034 nt3.91□□□□□ -1.78
SSU72P53538 SER1YOR184W 1188 nt3.91□□□□□ -1.78
SSU72P53538 RAD54YGL163C 2697 nt3.91□□□□□ -1.78
SSU72P53538 HRR25YPL204W 1485 nt3.91□□□□□ -1.78
SSU72P53538 TAF7YMR227C 1773 nt3.9□□□□□ -1.79
SSU72P53538 NOP16YER002W 696 nt3.9□□□□□ -1.79
SSU72P53538 FAU1YER183C 636 nt3.9□□□□□ -1.79
SSU72P53538 COS4YFL062W 1140 nt3.9□□□□□ -1.79
SSU72P53538 YGR153WYGR153W 654 nt3.9□□□□□ -1.79
SSU72P53538 GAT4YIR013C 366 nt3.9□□□□□ -1.79
SSU72P53538 COS3YML132W 1140 nt3.9□□□□□ -1.79
SSU72P53538 URE2YNL229C 1065 nt3.9□□□□□ -1.79
SSU72P53538 RFA2YNL312W 822 nt3.9□□□□□ -1.79
SSU72P53538 GSP2YOR185C 663 nt3.9□□□□□ -1.79
SSU72P53538 COS2YBR302C 1140 nt3.9□□□□□ -1.79
SSU72P53538 SPT23YKL020C 3249 nt3.89□□□□□ -1.79
SSU72P53538 UGA3YDL170W 1587 nt3.89□□□□□ -1.79
SSU72P53538 ERG4YGL012W 1422 nt3.89□□□□□ -1.79
SSU72P53538 TFA1YKL028W 1449 nt3.89□□□□□ -1.79
SSU72P53538 SCM3YDL139C 672 nt3.89□□□□□ -1.79
SSU72P53538 YFR045WYFR045W 930 nt3.89□□□□□ -1.79
SSU72P53538 RTA1YGR213C 954 nt3.89□□□□□ -1.79
SSU72P53538 YLR156WYLR156W 345 nt3.89□□□□□ -1.79
SSU72P53538 YLR157W-DYLR157W-D 213 nt3.89□□□□□ -1.79
SSU72P53538 YLR159WYLR159W 345 nt3.89□□□□□ -1.79
SSU72P53538 YLR161WYLR161W 345 nt3.89□□□□□ -1.79
SSU72P53538 ATP14YLR295C 375 nt3.89□□□□□ -1.79
SSU72P53538 YIM1YMR152W 1098 nt3.89□□□□□ -1.79
SSU72P53538 YPL199CYPL199C 723 nt3.89□□□□□ -1.79
SSU72P53538 YPR109WYPR109W 885 nt3.89□□□□□ -1.79
SSU72P53538 RCM1YNL022C 1473 nt3.89□□□□□ -1.79
SSU72P53538 BUD5YCR038C 1929 nt3.89□□□□□ -1.79
SSU72P53538 TAF8YML114C 1533 nt3.89□□□□□ -1.79
SSU72P53538 UBC1YDR177W 648 nt3.88□□□□□ -1.79
SSU72P53538 SPO73YER046W 432 nt3.88□□□□□ -1.79
SSU72P53538 FMP48YGR052W 1110 nt3.88□□□□□ -1.79
SSU72P53538 MHO1YJR008W 1017 nt3.88□□□□□ -1.79
SSU72P53538 UBI4YLL039C 1146 nt3.88□□□□□ -1.79
SSU72P53538 MDG1YNL173C 1101 nt3.88□□□□□ -1.79
SSU72P53538 RRP3YHR065C 1506 nt3.88□□□□□ -1.79
SSU72P53538 MTC1YJL123C 1437 nt3.87□□□□□ -1.79
SSU72P53538 SMF1YOL122C 1728 nt3.87□□□□□ -1.79
SSU72P53538 GSH2YOL049W 1476 nt3.87□□□□□ -1.79
SSU72P53538 OLE1YGL055W 1533 nt3.87□□□□□ -1.79
SSU72P53538 SRS2YJL092W 3525 nt3.87□□□□□ -1.79
SSU72P53538 EAF5YEL018W 840 nt3.87□□□□□ -1.79
SSU72P53538 AIM22YJL046W 1230 nt3.87□□□□□ -1.79
SSU72P53538 YAE1YJR067C 426 nt3.87□□□□□ -1.79
SSU72P53538 REX4YOL080C 870 nt3.87□□□□□ -1.79
SSU72P53538 YBR141W-AYBR141W-A 96 nt3.87□□□□□ -1.79
SSU72P53538 YPK9YOR291W 4419 nt3.87□□□□□ -1.79
SSU72P53538 JHD2YJR119C 2187 nt3.87□□□□□ -1.79
SSU72P53538 GPI18YBR004C 1302 nt3.87□□□□□ -1.79
SSU72P53538 PTR3YFR029W 2037 nt3.87□□□□□ -1.79
SSU72P53538 SER33YIL074C 1410 nt3.87□□□□□ -1.79
SSU72P53538 VID22YLR373C 2706 nt3.86□□□□□ -1.79
SSU72P53538 RAD30YDR419W 1899 nt3.86□□□□□ -1.79
SSU72P53538 PRM10YJL108C 1152 nt3.86□□□□□ -1.79
SSU72P53538 ISA1YLL027W 753 nt3.86□□□□□ -1.79
SSU72P53538 ELO3YLR372W 1038 nt3.86□□□□□ -1.79
SSU72P53538 TAF11YML015C 1041 nt3.86□□□□□ -1.79
SSU72P53538 OSW5YMR148W 447 nt3.86□□□□□ -1.79
SSU72P53538 ISR1YPR106W 1332 nt3.86□□□□□ -1.79
SSU72P53538 ENT1YDL161W 1365 nt3.86□□□□□ -1.79
SSU72P53538 TUB2YFL037W 1374 nt3.86□□□□□ -1.79
SSU72P53538 CDS1YBR029C 1374 nt3.86□□□□□ -1.79
SSU72P53538 YCR006CYCR006C 474 nt3.85□□□□□ -1.79
SSU72P53538 ARO2YGL148W 1131 nt3.85□□□□□ -1.79
SSU72P53538 COX2Q0250 756 nt3.85□□□□□ -1.79
SSU72P53538 ERG3YLR056W 1098 nt3.85□□□□□ -1.79
SSU72P53538 YML057C-AYML057C-A 390 nt3.85□□□□□ -1.79
SSU72P53538 YNL194CYNL194C 906 nt3.85□□□□□ -1.79
SSU72P53538 ARO7YPR060C 771 nt3.85□□□□□ -1.79
SSU72P53538 BUD7YOR299W 2241 nt3.85□□□□□ -1.79
SSU72P53538 SYF1YDR416W 2580 nt3.84□□□□□ -1.79
SSU72P53538 ALR2YFL050C 2577 nt3.84□□□□□ -1.79
SSU72P53538 HNT2YDR305C 654 nt3.84□□□□□ -1.79
SSU72P53538 SNM1YDR478W 597 nt3.84□□□□□ -1.79
SSU72P53538 RIP1YEL024W 648 nt3.84□□□□□ -1.79
SSU72P53538 SUT1YGL162W 900 nt3.84□□□□□ -1.79
SSU72P53538 YNG2YHR090C 849 nt3.84□□□□□ -1.79
SSU72P53538 ISY1YJR050W 708 nt3.84□□□□□ -1.79
SSU72P53538 ELF1YKL160W 438 nt3.84□□□□□ -1.79
SSU72P53538 YLR428CYLR428C 345 nt3.84□□□□□ -1.79
SSU72P53538 IBD2YNL164C 1056 nt3.84□□□□□ -1.79
SSU72P53538 RPS19AYOL121C 435 nt3.84□□□□□ -1.79
SSU72P53538 YPL245WYPL245W 1365 nt3.84□□□□□ -1.79
SSU72P53538 RRB1YMR131C 1536 nt3.84□□□□□ -1.8
SSU72P53538 TAF6YGL112C 1551 nt3.84□□□□□ -1.8
SSU72P53538 ATM1YMR301C 2073 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)CtK(CUU)C 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)D1tK(CUU)D1 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)D2tK(CUU)D2 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)E1tK(CUU)E1 73 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms