Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Hoxa4P06798 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hoxa4P06798 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hoxa4P06798 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Hoxa4P06798 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.89■□□□□ 0.77
Hoxa4P06798 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxa4P06798 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxa4P06798 Notumos-201ENSMUST00000151998 2659 ntBASIC19.89■□□□□ 0.77
Hoxa4P06798 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa4P06798 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa4P06798 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa4P06798 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.88■□□□□ 0.77
Hoxa4P06798 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Hoxa4P06798 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa4P06798 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.88■□□□□ 0.77
Hoxa4P06798 Gm15039-201ENSMUST00000118914 875 ntBASIC19.88■□□□□ 0.77
Hoxa4P06798 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.88■□□□□ 0.77
Hoxa4P06798 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa4P06798 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa4P06798 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa4P06798 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa4P06798 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa4P06798 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Hoxa4P06798 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa4P06798 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Hoxa4P06798 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa4P06798 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa4P06798 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa4P06798 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa4P06798 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa4P06798 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa4P06798 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.86■□□□□ 0.77
Hoxa4P06798 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Hoxa4P06798 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa4P06798 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.86■□□□□ 0.77
Hoxa4P06798 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa4P06798 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa4P06798 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa4P06798 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa4P06798 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hoxa4P06798 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa4P06798 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa4P06798 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hoxa4P06798 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa4P06798 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hoxa4P06798 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa4P06798 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa4P06798 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa4P06798 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Hoxa4P06798 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa4P06798 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa4P06798 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.84■□□□□ 0.77
Hoxa4P06798 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa4P06798 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa4P06798 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa4P06798 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa4P06798 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxa4P06798 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.83■□□□□ 0.77
Hoxa4P06798 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxa4P06798 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Hoxa4P06798 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Hoxa4P06798 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxa4P06798 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxa4P06798 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Hoxa4P06798 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Hoxa4P06798 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Hoxa4P06798 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
Hoxa4P06798 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxa4P06798 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxa4P06798 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxa4P06798 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxa4P06798 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hoxa4P06798 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa4P06798 Gm45417-201ENSMUST00000209533 758 ntBASIC19.82■□□□□ 0.76
Hoxa4P06798 Spcs1-204ENSMUST00000226782 949 ntBASIC19.82■□□□□ 0.76
Hoxa4P06798 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa4P06798 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa4P06798 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hoxa4P06798 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa4P06798 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hoxa4P06798 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa4P06798 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.81■□□□□ 0.76
Hoxa4P06798 Mir7075-201ENSMUST00000184187 82 ntBASIC19.81■□□□□ 0.76
Hoxa4P06798 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.81■□□□□ 0.76
Hoxa4P06798 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa4P06798 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxa4P06798 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxa4P06798 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxa4P06798 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxa4P06798 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxa4P06798 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.8■□□□□ 0.76
Hoxa4P06798 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 294 ms