Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ALDH1A1P00352 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ALDH1A1P00352 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ALDH1A1P00352 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
ALDH1A1P00352 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ALDH1A1P00352 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.08■■□□□ 1.77
ALDH1A1P00352 AC006970.2-201ENST00000450065 779 ntBASIC26.08■■□□□ 1.77
ALDH1A1P00352 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.08■■□□□ 1.77
ALDH1A1P00352 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.08■■□□□ 1.77
ALDH1A1P00352 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.08■■□□□ 1.77
ALDH1A1P00352 AL109923.1-201ENST00000618799 583 ntBASIC26.08■■□□□ 1.77
ALDH1A1P00352 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
ALDH1A1P00352 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
ALDH1A1P00352 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ALDH1A1P00352 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 AL355802.2-201ENST00000402069 882 ntBASIC26.07■■□□□ 1.76
ALDH1A1P00352 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
ALDH1A1P00352 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 AC091060.1-201ENST00000623524 1766 ntBASIC26.07■■□□□ 1.76
ALDH1A1P00352 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
ALDH1A1P00352 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 OR2I1P-207ENST00000453522 948 ntBASIC26.06■■□□□ 1.76
ALDH1A1P00352 AP005435.1-201ENST00000529293 1178 ntBASIC26.06■■□□□ 1.76
ALDH1A1P00352 BID-214ENST00000617586 542 ntTSL 5 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 AC105233.4-201ENST00000642045 216 ntBASIC26.06■■□□□ 1.76
ALDH1A1P00352 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ALDH1A1P00352 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ALDH1A1P00352 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
ALDH1A1P00352 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.05■■□□□ 1.76
ALDH1A1P00352 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ALDH1A1P00352 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ALDH1A1P00352 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ALDH1A1P00352 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ALDH1A1P00352 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.05■■□□□ 1.76
ALDH1A1P00352 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.05■■□□□ 1.76
ALDH1A1P00352 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.05■■□□□ 1.76
ALDH1A1P00352 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ALDH1A1P00352 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.05■■□□□ 1.76
ALDH1A1P00352 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ALDH1A1P00352 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ALDH1A1P00352 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ALDH1A1P00352 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.04■■□□□ 1.76
ALDH1A1P00352 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
ALDH1A1P00352 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ALDH1A1P00352 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.04■■□□□ 1.76
ALDH1A1P00352 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.04■■□□□ 1.76
ALDH1A1P00352 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ALDH1A1P00352 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.04■■□□□ 1.76
ALDH1A1P00352 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.04■■□□□ 1.76
ALDH1A1P00352 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.04■■□□□ 1.76
ALDH1A1P00352 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ALDH1A1P00352 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.04■■□□□ 1.76
ALDH1A1P00352 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
ALDH1A1P00352 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ALDH1A1P00352 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.03■■□□□ 1.76
ALDH1A1P00352 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.03■■□□□ 1.76
ALDH1A1P00352 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.03■■□□□ 1.76
ALDH1A1P00352 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ALDH1A1P00352 AL499627.2-201ENST00000606283 725 ntBASIC26.03■■□□□ 1.76
ALDH1A1P00352 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.03■■□□□ 1.76
ALDH1A1P00352 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ALDH1A1P00352 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
ALDH1A1P00352 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ALDH1A1P00352 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.03■■□□□ 1.76
ALDH1A1P00352 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
ALDH1A1P00352 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
ALDH1A1P00352 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.02■■□□□ 1.76
ALDH1A1P00352 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.02■■□□□ 1.76
ALDH1A1P00352 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ALDH1A1P00352 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.02■■□□□ 1.76
ALDH1A1P00352 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.02■■□□□ 1.76
ALDH1A1P00352 KRT18P61-201ENST00000585825 1298 ntBASIC26.02■■□□□ 1.76
ALDH1A1P00352 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.01■■□□□ 1.75
ALDH1A1P00352 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.01■■□□□ 1.75
ALDH1A1P00352 NCF1B-203ENST00000435988 1254 ntBASIC26.01■■□□□ 1.75
ALDH1A1P00352 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.01■■□□□ 1.75
ALDH1A1P00352 AC010525.1-201ENST00000585559 441 ntBASIC26.01■■□□□ 1.75
ALDH1A1P00352 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.01■■□□□ 1.75
ALDH1A1P00352 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.01■■□□□ 1.75
ALDH1A1P00352 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ALDH1A1P00352 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
ALDH1A1P00352 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26■■□□□ 1.75
ALDH1A1P00352 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
ALDH1A1P00352 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26■■□□□ 1.75
ALDH1A1P00352 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ALDH1A1P00352 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26■■□□□ 1.75
ALDH1A1P00352 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms