Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 AC016700.1-201ENST00000429424 312 ntBASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 RN7SL277P-201ENST00000481521 288 ntBASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 AL022334.2-201ENST00000610000 484 ntBASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 TUBBP5-203ENST00000508529 1334 ntBASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRFBP1Q8NEF9 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 MIR1247-201ENST00000408206 136 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 AC006987.1-201ENST00000413610 527 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 BX284668.4-201ENST00000453917 508 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 DUX4L50-201ENST00000455245 715 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 AKR7A2P1-201ENST00000460134 915 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 POU5F1P2-201ENST00000521750 823 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 KRT8P1-201ENST00000557533 1207 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 AC091544.8-201ENST00000619490 361 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 FRMPD2B-201ENST00000431305 1347 ntBASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRFBP1Q8NEF9 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms