Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PCDH1Q08174 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 BRD7P5-201ENST00000299197 1822 ntBASIC13.67□□□□□ -0.22
PCDH1Q08174 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDH1Q08174 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDH1Q08174 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
PCDH1Q08174 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.67□□□□□ -0.22
PCDH1Q08174 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.67□□□□□ -0.22
PCDH1Q08174 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.67□□□□□ -0.22
PCDH1Q08174 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDH1Q08174 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDH1Q08174 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.67□□□□□ -0.22
PCDH1Q08174 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDH1Q08174 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PCDH1Q08174 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 PPT1-213ENST00000641319 2388 ntBASIC13.67□□□□□ -0.22
PCDH1Q08174 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PCDH1Q08174 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PCDH1Q08174 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCDH1Q08174 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
PCDH1Q08174 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.66□□□□□ -0.22
PCDH1Q08174 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
PCDH1Q08174 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 AC105206.1-202ENST00000314927 2368 ntBASIC13.66□□□□□ -0.22
PCDH1Q08174 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDH1Q08174 CICP8-201ENST00000455800 2813 ntBASIC13.66□□□□□ -0.22
PCDH1Q08174 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCDH1Q08174 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 RN7SKP214-201ENST00000364208 315 ntBASIC13.66□□□□□ -0.22
PCDH1Q08174 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDH1Q08174 BRWD1P1-201ENST00000401091 371 ntBASIC13.66□□□□□ -0.22
PCDH1Q08174 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 NKAIN1P1-201ENST00000435754 582 ntBASIC13.66□□□□□ -0.22
PCDH1Q08174 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.66□□□□□ -0.22
PCDH1Q08174 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDH1Q08174 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 AC044849.1-201ENST00000519737 1188 ntBASIC13.66□□□□□ -0.22
PCDH1Q08174 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.66□□□□□ -0.22
PCDH1Q08174 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.66□□□□□ -0.22
PCDH1Q08174 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDH1Q08174 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDH1Q08174 AL033527.4-201ENST00000641026 673 ntBASIC13.66□□□□□ -0.22
PCDH1Q08174 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PCDH1Q08174 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PCDH1Q08174 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDH1Q08174 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 AL591122.2-201ENST00000624125 1853 ntBASIC13.65□□□□□ -0.22
PCDH1Q08174 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms