Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 AC013268.4-201ENST00000637413 2228 ntBASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 PPM1N-204ENST00000401593 548 ntTSL 2 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 RN7SL307P-201ENST00000490342 295 ntBASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 AC003072.1-201ENST00000510957 612 ntBASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 B2M-202ENST00000544417 933 ntTSL 5 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 AP000553.1-201ENST00000610143 430 ntBASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 Z82244.1-201ENST00000631502 840 ntBASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC21.19■□□□□ 0.98
RIMBP3Q9UFD9 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 RN7SL342P-201ENST00000479616 294 ntBASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 AL731555.1-201ENST00000634547 1259 ntBASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 RPSAP46-201ENST00000428316 882 ntBASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 AC091153.4-201ENST00000570493 480 ntTSL 5 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC21.18■□□□□ 0.98
RIMBP3Q9UFD9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 AC040160.2-201ENST00000623816 1675 ntBASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 C19orf38-201ENST00000397820 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 AC006022.1-201ENST00000425261 388 ntBASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 AC104333.3-201ENST00000449334 479 ntBASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 AC093802.2-201ENST00000567853 583 ntBASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 AC106774.4-201ENST00000600799 409 ntBASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 LRRC6-201ENST00000250173 1672 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC21.17■□□□□ 0.98
RIMBP3Q9UFD9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 QRFPR-201ENST00000334383 1215 ntTSL 2 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 AP000346.1-201ENST00000390329 1087 ntTSL 5 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 OR1X5P-201ENST00000510464 894 ntBASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 OR5BA1P-201ENST00000529722 982 ntBASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 AC244517.2-204ENST00000624802 415 ntTSL 3 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIMBP3Q9UFD9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms