Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 FMO6P-201ENST00000236166 1620 ntBASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRICKLE4Q2TBC4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 SALL4P6-201ENST00000429385 1691 ntBASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 AL133338.1-201ENST00000565695 1517 ntBASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 AL591122.2-201ENST00000624125 1853 ntBASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 AL133467.4-201ENST00000602953 725 ntBASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 KRT8P43-201ENST00000406052 1458 ntBASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.15□□□□□ -0.3
PRICKLE4Q2TBC4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
PRICKLE4Q2TBC4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
PRICKLE4Q2TBC4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 MIR645-201ENST00000385283 94 ntBASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms