Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 SKA2-205ENST00000580541 689 ntTSL 3 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 CDK7-214ENST00000626796 358 ntTSL 5 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AC067931.2-201ENST00000623655 2003 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AC073869.1-201ENST00000415574 2762 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 KRT17P5-201ENST00000332088 839 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AC103592.1-201ENST00000394513 664 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 KRT18P15-201ENST00000458108 1291 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 AC022494.1-201ENST00000466044 728 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AL161670.2-201ENST00000557650 1227 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 RN7SL574P-201ENST00000581512 297 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 AC020922.3-201ENST00000595064 547 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AF254983.2-201ENST00000612331 135 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 AL021578.1-201ENST00000613646 709 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 MIR6769A-201ENST00000617340 73 ntBASIC10.97□□□□□ -0.65
TRBV12-3P01733 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms