Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PDGFBP01127 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PDGFBP01127 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
PDGFBP01127 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PDGFBP01127 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.02□□□□□ -0.16
PDGFBP01127 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.02□□□□□ -0.16
PDGFBP01127 MYADML-201ENST00000474610 2147 ntBASIC14.02□□□□□ -0.16
PDGFBP01127 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDGFBP01127 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDGFBP01127 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC14.02□□□□□ -0.16
PDGFBP01127 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDGFBP01127 TMBIM7P-203ENST00000641617 1718 ntBASIC14.02□□□□□ -0.16
PDGFBP01127 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDGFBP01127 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PDGFBP01127 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDGFBP01127 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.02□□□□□ -0.17
PDGFBP01127 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC14.02□□□□□ -0.17
PDGFBP01127 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC14.02□□□□□ -0.17
PDGFBP01127 MIR1307-201ENST00000408840 149 ntBASIC14.02□□□□□ -0.17
PDGFBP01127 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.02□□□□□ -0.17
PDGFBP01127 AC000077.1-201ENST00000420012 953 ntBASIC14.02□□□□□ -0.17
PDGFBP01127 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.02□□□□□ -0.17
PDGFBP01127 RBPMSLP-201ENST00000433427 502 ntBASIC14.02□□□□□ -0.17
PDGFBP01127 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.02□□□□□ -0.17
PDGFBP01127 AL450346.2-201ENST00000495602 1024 ntBASIC14.02□□□□□ -0.17
PDGFBP01127 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC14.02□□□□□ -0.17
PDGFBP01127 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PDGFBP01127 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.02□□□□□ -0.17
PDGFBP01127 MIR5091-201ENST00000578707 93 ntBASIC14.02□□□□□ -0.17
PDGFBP01127 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC14.02□□□□□ -0.17
PDGFBP01127 AC021321.1-201ENST00000607397 1113 ntBASIC14.02□□□□□ -0.17
PDGFBP01127 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.02□□□□□ -0.17
PDGFBP01127 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDGFBP01127 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDGFBP01127 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDGFBP01127 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDGFBP01127 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PDGFBP01127 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDGFBP01127 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDGFBP01127 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.02□□□□□ -0.17
PDGFBP01127 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.01□□□□□ -0.17
PDGFBP01127 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.01□□□□□ -0.17
PDGFBP01127 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PDGFBP01127 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PDGFBP01127 MIR181D-201ENST00000384853 137 ntBASIC14.01□□□□□ -0.17
PDGFBP01127 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PDGFBP01127 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC14.01□□□□□ -0.17
PDGFBP01127 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC14.01□□□□□ -0.17
PDGFBP01127 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PDGFBP01127 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.01□□□□□ -0.17
PDGFBP01127 AL161727.1-201ENST00000457409 530 ntBASIC14.01□□□□□ -0.17
PDGFBP01127 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.01□□□□□ -0.17
PDGFBP01127 OR52V1P-201ENST00000515557 898 ntBASIC14.01□□□□□ -0.17
PDGFBP01127 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.01□□□□□ -0.17
PDGFBP01127 BOLA3P2-201ENST00000586496 323 ntBASIC14.01□□□□□ -0.17
PDGFBP01127 AC134878.2-201ENST00000620700 1265 ntBASIC14.01□□□□□ -0.17
PDGFBP01127 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.01□□□□□ -0.17
PDGFBP01127 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
PDGFBP01127 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
PDGFBP01127 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDGFBP01127 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14□□□□□ -0.17
PDGFBP01127 NORAD-201ENST00000565493 5339 ntBASIC14□□□□□ -0.17
PDGFBP01127 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
PDGFBP01127 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
PDGFBP01127 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14□□□□□ -0.17
PDGFBP01127 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14□□□□□ -0.17
PDGFBP01127 AC091951.1-201ENST00000512854 2465 ntBASIC14□□□□□ -0.17
PDGFBP01127 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
PDGFBP01127 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14□□□□□ -0.17
PDGFBP01127 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC14□□□□□ -0.17
PDGFBP01127 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC14□□□□□ -0.17
PDGFBP01127 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 OR7E155P-201ENST00000412208 1014 ntBASIC14□□□□□ -0.17
PDGFBP01127 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 COQ10BP2-201ENST00000513804 724 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms