Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ift88Q61371 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ift88Q61371 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ift88Q61371 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Ift88Q61371 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.18□□□□□ -0.46
Ift88Q61371 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ift88Q61371 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.17□□□□□ -0.46
Ift88Q61371 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.17□□□□□ -0.46
Ift88Q61371 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.17□□□□□ -0.46
Ift88Q61371 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.17□□□□□ -0.46
Ift88Q61371 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.17□□□□□ -0.46
Ift88Q61371 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Ift88Q61371 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.17□□□□□ -0.46
Ift88Q61371 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ift88Q61371 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.17□□□□□ -0.46
Ift88Q61371 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.17□□□□□ -0.46
Ift88Q61371 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.17□□□□□ -0.46
Ift88Q61371 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.17□□□□□ -0.46
Ift88Q61371 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.17□□□□□ -0.46
Ift88Q61371 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ift88Q61371 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.17□□□□□ -0.46
Ift88Q61371 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ift88Q61371 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ift88Q61371 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.16□□□□□ -0.46
Ift88Q61371 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.16□□□□□ -0.46
Ift88Q61371 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ift88Q61371 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ift88Q61371 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.16□□□□□ -0.46
Ift88Q61371 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ift88Q61371 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ift88Q61371 Gm12419-201ENSMUST00000116649 636 ntBASIC12.16□□□□□ -0.46
Ift88Q61371 Gm15615-201ENSMUST00000118876 198 ntBASIC12.16□□□□□ -0.46
Ift88Q61371 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.16□□□□□ -0.46
Ift88Q61371 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Ift88Q61371 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ift88Q61371 Gm42859-201ENSMUST00000199572 193 ntBASIC12.16□□□□□ -0.46
Ift88Q61371 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.16□□□□□ -0.46
Ift88Q61371 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ift88Q61371 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms