Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 AL157996.1-201ENST00000624684 2299 ntBASIC9.47□□□□□ -0.89
SYCNQ0VAF6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYCNQ0VAF6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 MBLAC2-202ENST00000514906 1936 ntBASIC9.46□□□□□ -0.89
SYCNQ0VAF6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC9.46□□□□□ -0.89
SYCNQ0VAF6 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AL645933.1-201ENST00000440087 609 ntBASIC9.46□□□□□ -0.9
SYCNQ0VAF6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 GPR53P-205ENST00000457298 1084 ntBASIC9.46□□□□□ -0.9
SYCNQ0VAF6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AC140658.4-201ENST00000561990 352 ntBASIC9.46□□□□□ -0.9
SYCNQ0VAF6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 EEF1DP1-201ENST00000585891 896 ntBASIC9.46□□□□□ -0.9
SYCNQ0VAF6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC9.46□□□□□ -0.9
SYCNQ0VAF6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AL591471.1-201ENST00000621855 229 ntBASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AC004899.2-201ENST00000622993 3860 ntBASIC9.46□□□□□ -0.9
SYCNQ0VAF6 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCNQ0VAF6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SYCNQ0VAF6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SYCNQ0VAF6 LINC02486-201ENST00000604157 3000 ntBASIC9.45□□□□□ -0.9
SYCNQ0VAF6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms