Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC15.26■□□□□ 0.03
SSR1P43307 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.26■□□□□ 0.03
SSR1P43307 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR1P43307 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR1P43307 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SSR1P43307 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.26■□□□□ 0.03
SSR1P43307 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SSR1P43307 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR1P43307 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR1P43307 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SSR1P43307 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC15.26■□□□□ 0.03
SSR1P43307 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SSR1P43307 SHC1P1-201ENST00000425230 1745 ntBASIC15.26■□□□□ 0.03
SSR1P43307 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC15.26■□□□□ 0.03
SSR1P43307 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR1P43307 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR1P43307 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR1P43307 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SSR1P43307 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SSR1P43307 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR1P43307 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 MIR326-201ENST00000362220 95 ntBASIC15.25■□□□□ 0.03
SSR1P43307 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SSR1P43307 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SSR1P43307 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR1P43307 AL161932.2-201ENST00000435436 679 ntBASIC15.25■□□□□ 0.03
SSR1P43307 AC234783.1-201ENST00000441761 496 ntBASIC15.25■□□□□ 0.03
SSR1P43307 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR1P43307 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.25■□□□□ 0.03
SSR1P43307 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.25■□□□□ 0.03
SSR1P43307 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.25■□□□□ 0.03
SSR1P43307 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.25■□□□□ 0.03
SSR1P43307 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.25■□□□□ 0.03
SSR1P43307 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.25■□□□□ 0.03
SSR1P43307 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR1P43307 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.25■□□□□ 0.03
SSR1P43307 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.25■□□□□ 0.03
SSR1P43307 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSR1P43307 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR1P43307 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSR1P43307 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSR1P43307 AC145098.2-201ENST00000623593 3026 ntBASIC15.25■□□□□ 0.03
SSR1P43307 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.24■□□□□ 0.03
SSR1P43307 AL022313.4-201ENST00000562756 2046 ntBASIC15.24■□□□□ 0.03
SSR1P43307 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 HIST2H2BB-201ENST00000449108 381 ntBASIC15.24■□□□□ 0.03
SSR1P43307 KLF2P4-201ENST00000451959 1225 ntBASIC15.24■□□□□ 0.03
SSR1P43307 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.24■□□□□ 0.03
SSR1P43307 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.24■□□□□ 0.03
SSR1P43307 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.24■□□□□ 0.03
SSR1P43307 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.24■□□□□ 0.03
SSR1P43307 AC008825.2-201ENST00000603374 718 ntBASIC15.24■□□□□ 0.03
SSR1P43307 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SSR1P43307 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR1P43307 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.24■□□□□ 0.03
SSR1P43307 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms