Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC124944.3-201ENST00000607976 1304 ntBASIC15.28■□□□□ 0.04
HTTP42858 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.28■□□□□ 0.04
HTTP42858 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC15.28■□□□□ 0.04
HTTP42858 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 RPL30-213ENST00000523172 274 ntTSL 5 BASIC15.28■□□□□ 0.04
HTTP42858 GOLGA2P10-201ENST00000550961 817 ntBASIC15.28■□□□□ 0.04
HTTP42858 AC009132.1-201ENST00000565194 320 ntBASIC15.28■□□□□ 0.04
HTTP42858 KRT18P8-201ENST00000581937 1246 ntBASIC15.28■□□□□ 0.04
HTTP42858 TLE2-205ENST00000586422 389 ntTSL 5 BASIC15.28■□□□□ 0.04
HTTP42858 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC15.28■□□□□ 0.04
HTTP42858 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.28■□□□□ 0.04
HTTP42858 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HTTP42858 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HTTP42858 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HTTP42858 AC012100.1-201ENST00000470304 282 ntBASIC15.28■□□□□ 0.04
HTTP42858 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC15.28■□□□□ 0.04
HTTP42858 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC15.28■□□□□ 0.04
HTTP42858 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HTTP42858 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTTP42858 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.27■□□□□ 0.04
HTTP42858 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HTTP42858 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTTP42858 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTTP42858 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
HTTP42858 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HTTP42858 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTTP42858 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTTP42858 AC026271.1-201ENST00000447794 1348 ntBASIC15.27■□□□□ 0.04
HTTP42858 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.27■□□□□ 0.04
HTTP42858 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTTP42858 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HTTP42858 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTTP42858 NOS2P3-201ENST00000411468 867 ntBASIC15.27■□□□□ 0.04
HTTP42858 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC15.27■□□□□ 0.04
HTTP42858 NOS2P2-201ENST00000426269 867 ntBASIC15.27■□□□□ 0.04
HTTP42858 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.27■□□□□ 0.04
HTTP42858 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTTP42858 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.27■□□□□ 0.04
HTTP42858 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.27■□□□□ 0.03
HTTP42858 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTTP42858 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.27■□□□□ 0.03
HTTP42858 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTTP42858 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTTP42858 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC15.27■□□□□ 0.03
HTTP42858 HAX1-211ENST00000532105 771 ntTSL 3 BASIC15.27■□□□□ 0.03
HTTP42858 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC15.27■□□□□ 0.03
HTTP42858 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC15.27■□□□□ 0.03
HTTP42858 AC022382.1-201ENST00000602768 336 ntBASIC15.27■□□□□ 0.03
HTTP42858 AC245369.8-201ENST00000636589 306 ntBASIC15.27■□□□□ 0.03
HTTP42858 BIN3-212ENST00000640731 450 ntTSL 5 BASIC15.27■□□□□ 0.03
HTTP42858 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.27■□□□□ 0.03
HTTP42858 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTTP42858 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.27■□□□□ 0.03
HTTP42858 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTTP42858 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 CA6-205ENST00000480186 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTTP42858 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC15.26■□□□□ 0.03
HTTP42858 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTTP42858 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.26■□□□□ 0.03
HTTP42858 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 AC012066.1-201ENST00000439252 694 ntBASIC15.26■□□□□ 0.03
HTTP42858 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.26■□□□□ 0.03
HTTP42858 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC15.26■□□□□ 0.03
HTTP42858 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC15.26■□□□□ 0.03
HTTP42858 FGD5P1-202ENST00000614866 2498 ntBASIC15.26■□□□□ 0.03
HTTP42858 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC15.26■□□□□ 0.03
HTTP42858 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HTTP42858 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTTP42858 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTTP42858 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 KLK8-203ENST00000347619 555 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.26■□□□□ 0.03
HTTP42858 IGHVII-74-1-201ENST00000517572 241 ntBASIC15.26■□□□□ 0.03
HTTP42858 HNRNPA1P7-201ENST00000521273 963 ntBASIC15.26■□□□□ 0.03
HTTP42858 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC15.26■□□□□ 0.03
HTTP42858 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms