Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NFKB1P19838 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.46□□□□□ -0.09
NFKB1P19838 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 AC004898.1-201ENST00000451057 766 ntBASIC14.46□□□□□ -0.09
NFKB1P19838 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 AC125604.1-201ENST00000496255 707 ntBASIC14.46□□□□□ -0.09
NFKB1P19838 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.46□□□□□ -0.09
NFKB1P19838 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.46□□□□□ -0.09
NFKB1P19838 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.46□□□□□ -0.09
NFKB1P19838 KRT18P8-201ENST00000581937 1246 ntBASIC14.46□□□□□ -0.09
NFKB1P19838 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NFKB1P19838 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NFKB1P19838 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.46□□□□□ -0.09
NFKB1P19838 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.46□□□□□ -0.09
NFKB1P19838 MIR6752-201ENST00000618442 71 ntBASIC14.46□□□□□ -0.09
NFKB1P19838 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.46□□□□□ -0.09
NFKB1P19838 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NFKB1P19838 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.46□□□□□ -0.09
NFKB1P19838 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.46□□□□□ -0.09
NFKB1P19838 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.46□□□□□ -0.09
NFKB1P19838 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NFKB1P19838 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NFKB1P19838 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.46□□□□□ -0.1
NFKB1P19838 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NFKB1P19838 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NFKB1P19838 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NFKB1P19838 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NFKB1P19838 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NFKB1P19838 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.46□□□□□ -0.1
NFKB1P19838 BRD7P5-201ENST00000299197 1822 ntBASIC14.45□□□□□ -0.1
NFKB1P19838 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 KRT8P21-201ENST00000430398 1491 ntBASIC14.45□□□□□ -0.1
NFKB1P19838 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NFKB1P19838 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.45□□□□□ -0.1
NFKB1P19838 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 AC073869.1-201ENST00000415574 2762 ntBASIC14.45□□□□□ -0.1
NFKB1P19838 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.45□□□□□ -0.1
NFKB1P19838 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
NFKB1P19838 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.45□□□□□ -0.1
NFKB1P19838 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 AC093752.3-201ENST00000567343 901 ntBASIC14.45□□□□□ -0.1
NFKB1P19838 AL022334.2-201ENST00000610000 484 ntBASIC14.45□□□□□ -0.1
NFKB1P19838 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.45□□□□□ -0.1
NFKB1P19838 AC073548.1-201ENST00000624088 1882 ntBASIC14.45□□□□□ -0.1
NFKB1P19838 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NFKB1P19838 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.45□□□□□ -0.1
NFKB1P19838 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NFKB1P19838 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.45□□□□□ -0.1
NFKB1P19838 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 LINC01165-201ENST00000445190 1623 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms