Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
KIAA1549Q9HCM3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.52□□□□□ -0.41
KIAA1549Q9HCM3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.52□□□□□ -0.41
KIAA1549Q9HCM3 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KIAA1549Q9HCM3 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KIAA1549Q9HCM3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KIAA1549Q9HCM3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 AC097065.1-201ENST00000425737 517 ntBASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 OR5BD1P-201ENST00000532527 817 ntBASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 AP000322.3-201ENST00000608665 388 ntBASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 Z98885.3-201ENST00000624882 1757 ntBASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KIAA1549Q9HCM3 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 OR52M2P-201ENST00000414298 959 ntBASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AC007250.1-201ENST00000608934 338 ntBASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AC018638.5-201ENST00000450885 754 ntBASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 AL359845.1-201ENST00000458202 1648 ntBASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.5□□□□□ -0.41
KIAA1549Q9HCM3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms