Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CopeO89079 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CopeO89079 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.36□□□□□ -0.59
CopeO89079 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CopeO89079 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
CopeO89079 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
CopeO89079 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Gm14592-201ENSMUST00000117201 560 ntBASIC11.36□□□□□ -0.59
CopeO89079 Gm12218-201ENSMUST00000117666 399 ntBASIC11.36□□□□□ -0.59
CopeO89079 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.36□□□□□ -0.59
CopeO89079 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.36□□□□□ -0.59
CopeO89079 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.36□□□□□ -0.59
CopeO89079 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Gm9111-201ENSMUST00000219394 709 ntBASIC11.36□□□□□ -0.59
CopeO89079 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.36□□□□□ -0.59
CopeO89079 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.36□□□□□ -0.59
CopeO89079 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.36□□□□□ -0.59
CopeO89079 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CopeO89079 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CopeO89079 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CopeO89079 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CopeO89079 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
CopeO89079 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.35□□□□□ -0.59
CopeO89079 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.35□□□□□ -0.59
CopeO89079 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.35□□□□□ -0.59
CopeO89079 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Gm24844-201ENSMUST00000158679 127 ntBASIC11.35□□□□□ -0.59
CopeO89079 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CopeO89079 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Gm28032-201ENSMUST00000184104 96 ntBASIC11.35□□□□□ -0.59
CopeO89079 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Gm9540-201ENSMUST00000188230 478 ntBASIC11.35□□□□□ -0.59
CopeO89079 Gm37284-201ENSMUST00000193607 539 ntBASIC11.35□□□□□ -0.59
CopeO89079 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.35□□□□□ -0.59
CopeO89079 Gm42859-201ENSMUST00000199572 193 ntBASIC11.35□□□□□ -0.59
CopeO89079 Gm44506-201ENSMUST00000206278 965 ntBASIC11.35□□□□□ -0.59
CopeO89079 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.35□□□□□ -0.59
CopeO89079 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.35□□□□□ -0.59
CopeO89079 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms