Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 ACA64.2-201ENST00000459014 129 ntBASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AC022616.1-201ENST00000518688 554 ntBASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 HILS1-202ENST00000545329 423 ntBASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AC008735.3-201ENST00000596646 500 ntBASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 PRSS30P-206ENST00000641773 873 ntBASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.44□□□□□ -0.26
DEPDC4Q8N2C3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AC003102.2-201ENST00000589195 1469 ntBASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AL139094.1-201ENST00000405549 1188 ntBASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AC112492.5-201ENST00000421897 457 ntBASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AC026410.3-201ENST00000514280 936 ntBASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AP005482.1-201ENST00000563722 1273 ntBASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AC124283.3-201ENST00000570869 594 ntBASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
DEPDC4Q8N2C3 NCLP1-201ENST00000445357 1963 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms