Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 RPL7P3-201ENST00000441388 714 ntBASIC12.79□□□□□ -0.36
LRRC28Q86X40 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 AP000812.2-201ENST00000538934 718 ntBASIC12.79□□□□□ -0.36
LRRC28Q86X40 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 AC133552.6-201ENST00000613406 534 ntBASIC12.79□□□□□ -0.36
LRRC28Q86X40 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 COX11-210ENST00000639671 696 ntBASIC12.79□□□□□ -0.36
LRRC28Q86X40 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 TLE1P1-201ENST00000422965 589 ntBASIC12.78□□□□□ -0.36
LRRC28Q86X40 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 CTBP2P5-201ENST00000454986 1264 ntBASIC12.78□□□□□ -0.36
LRRC28Q86X40 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 AC025279.2-201ENST00000569730 653 ntBASIC12.78□□□□□ -0.36
LRRC28Q86X40 GNRHR2-203ENST00000581100 1187 ntBASIC12.78□□□□□ -0.36
LRRC28Q86X40 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 SALL4P5-201ENST00000419001 1760 ntBASIC12.78□□□□□ -0.36
LRRC28Q86X40 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LRRC28Q86X40 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRC28Q86X40 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LRRC28Q86X40 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
LRRC28Q86X40 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRC28Q86X40 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
LRRC28Q86X40 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRC28Q86X40 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms