Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
RFC1P35251 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.09■□□□□ 0.01
RFC1P35251 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.09■□□□□ 0.01
RFC1P35251 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.09■□□□□ 0.01
RFC1P35251 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
RFC1P35251 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.09■□□□□ 0.01
RFC1P35251 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RFC1P35251 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.09■□□□□ 0.01
RFC1P35251 XBP1P1-201ENST00000436573 652 ntBASIC15.09■□□□□ 0.01
RFC1P35251 AC104073.2-201ENST00000453737 312 ntBASIC15.09■□□□□ 0.01
RFC1P35251 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.09■□□□□ 0.01
RFC1P35251 FAM8A2P-201ENST00000528813 1142 ntBASIC15.09■□□□□ 0.01
RFC1P35251 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
RFC1P35251 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.09■□□□□ 0.01
RFC1P35251 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.09■□□□□ 0.01
RFC1P35251 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.09■□□□□ 0.01
RFC1P35251 AL359881.2-201ENST00000602973 570 ntBASIC15.09■□□□□ 0.01
RFC1P35251 AC092299.1-201ENST00000632679 757 ntBASIC15.09■□□□□ 0.01
RFC1P35251 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.09■□□□□ 0.01
RFC1P35251 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.09■□□□□ 0.01
RFC1P35251 AC068587.8-201ENST00000641239 219 ntBASIC15.09■□□□□ 0.01
RFC1P35251 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.09■□□□□ 0.01
RFC1P35251 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 AHCYP4-201ENST00000419201 1315 ntBASIC15.09■□□□□ 0.01
RFC1P35251 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.09■□□□□ 0.01
RFC1P35251 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.09■□□□□ 0.01
RFC1P35251 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RFC1P35251 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.09■□□□□ 0.01
RFC1P35251 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
RFC1P35251 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RFC1P35251 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFC1P35251 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFC1P35251 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RFC1P35251 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
RFC1P35251 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
RFC1P35251 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFC1P35251 AL928654.5-201ENST00000624831 2501 ntBASIC15.08■□□□□ 0.01
RFC1P35251 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.08■□□□□ 0.01
RFC1P35251 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFC1P35251 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
RFC1P35251 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.08■□□□□ 0
RFC1P35251 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RFC1P35251 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.08■□□□□ 0
RFC1P35251 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.08■□□□□ 0
RFC1P35251 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.08■□□□□ 0
RFC1P35251 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.08■□□□□ 0
RFC1P35251 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.08■□□□□ 0
RFC1P35251 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.08■□□□□ 0
RFC1P35251 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.08■□□□□ 0
RFC1P35251 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.08■□□□□ 0
RFC1P35251 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.08■□□□□ 0
RFC1P35251 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.08■□□□□ 0
RFC1P35251 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.08■□□□□ 0
RFC1P35251 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RFC1P35251 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.08■□□□□ 0
RFC1P35251 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.08■□□□□ 0
RFC1P35251 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.08■□□□□ 0
RFC1P35251 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.08■□□□□ 0
RFC1P35251 AC091271.1-201ENST00000611877 1162 ntBASIC15.08■□□□□ 0
RFC1P35251 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
RFC1P35251 AL591471.1-201ENST00000621855 229 ntBASIC15.08■□□□□ 0
RFC1P35251 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.08■□□□□ 0
RFC1P35251 AL033527.4-201ENST00000641026 673 ntBASIC15.08■□□□□ 0
RFC1P35251 AC004923.1-202ENST00000642106 209 ntBASIC15.08■□□□□ 0
RFC1P35251 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.08■□□□□ 0
RFC1P35251 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
RFC1P35251 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RFC1P35251 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms