Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SYN1P17600 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SYN1P17600 RN7SKP212-201ENST00000410851 328 ntBASIC15.29■□□□□ 0.04
SYN1P17600 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.29■□□□□ 0.04
SYN1P17600 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC15.29■□□□□ 0.04
SYN1P17600 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC15.29■□□□□ 0.04
SYN1P17600 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.29■□□□□ 0.04
SYN1P17600 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 CDKN2A-AS1-201ENST00000441769 823 ntBASIC15.29■□□□□ 0.04
SYN1P17600 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.29■□□□□ 0.04
SYN1P17600 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC15.29■□□□□ 0.04
SYN1P17600 RN7SL684P-201ENST00000465665 294 ntBASIC15.29■□□□□ 0.04
SYN1P17600 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.29■□□□□ 0.04
SYN1P17600 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.29■□□□□ 0.04
SYN1P17600 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC15.29■□□□□ 0.04
SYN1P17600 AP003040.1-201ENST00000532044 1024 ntBASIC15.29■□□□□ 0.04
SYN1P17600 MST1L-204ENST00000545160 559 ntTSL 4 BASIC15.29■□□□□ 0.04
SYN1P17600 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.29■□□□□ 0.04
SYN1P17600 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.29■□□□□ 0.04
SYN1P17600 BX322562.1-201ENST00000617004 561 ntBASIC15.29■□□□□ 0.04
SYN1P17600 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
SYN1P17600 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SYN1P17600 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.29■□□□□ 0.04
SYN1P17600 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYN1P17600 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SYN1P17600 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SYN1P17600 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 ASS1P1-201ENST00000402854 1237 ntBASIC15.28■□□□□ 0.04
SYN1P17600 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.28■□□□□ 0.04
SYN1P17600 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC15.28■□□□□ 0.04
SYN1P17600 AL161932.2-201ENST00000435436 679 ntBASIC15.28■□□□□ 0.04
SYN1P17600 PSME2P2-201ENST00000453033 700 ntBASIC15.28■□□□□ 0.04
SYN1P17600 VDAC1P11-201ENST00000458323 852 ntBASIC15.28■□□□□ 0.04
SYN1P17600 RN7SL523P-201ENST00000484401 298 ntBASIC15.28■□□□□ 0.04
SYN1P17600 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC15.28■□□□□ 0.04
SYN1P17600 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 AC010202.1-201ENST00000551181 405 ntBASIC15.28■□□□□ 0.04
SYN1P17600 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.28■□□□□ 0.04
SYN1P17600 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SYN1P17600 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC15.28■□□□□ 0.04
SYN1P17600 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC15.28■□□□□ 0.04
SYN1P17600 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC15.28■□□□□ 0.04
SYN1P17600 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.28■□□□□ 0.04
SYN1P17600 DBET-201ENST00000630918 3363 ntBASIC15.28■□□□□ 0.04
SYN1P17600 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
SYN1P17600 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SYN1P17600 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYN1P17600 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SYN1P17600 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SYN1P17600 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.27■□□□□ 0.04
SYN1P17600 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.27■□□□□ 0.04
SYN1P17600 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYN1P17600 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SYN1P17600 GUCY2EP-203ENST00000531117 1918 ntBASIC15.27■□□□□ 0.04
SYN1P17600 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
SYN1P17600 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SYN1P17600 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.27■□□□□ 0.04
SYN1P17600 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYN1P17600 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYN1P17600 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYN1P17600 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
SYN1P17600 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SYN1P17600 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYN1P17600 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.27■□□□□ 0.04
SYN1P17600 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYN1P17600 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms