Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RtcAQ9D7H3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm25343-201ENSMUST00000157460 107 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm6407-201ENSMUST00000176468 549 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Mir6998-201ENSMUST00000183343 64 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm19009-201ENSMUST00000223072 823 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RtcAQ9D7H3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RtcAQ9D7H3 Snord55-201ENSMUST00000174939 79 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms