Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Gm18881-201ENSMUST00000220450 1545 ntBASIC11.03□□□□□ -0.64
Sox18P43680 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox18P43680 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sox18P43680 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox18P43680 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox18P43680 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.02□□□□□ -0.65
Sox18P43680 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox18P43680 Gm15196-201ENSMUST00000121406 482 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.02□□□□□ -0.65
Sox18P43680 Mir432-201ENSMUST00000157230 75 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Gm16030-201ENSMUST00000159098 603 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Gm9162-201ENSMUST00000182081 991 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Gm7627-201ENSMUST00000183205 999 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Gm27845-201ENSMUST00000184479 114 ntBASIC11.02□□□□□ -0.65
Sox18P43680 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Sox18P43680 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sox18P43680 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox18P43680 Gm6331-201ENSMUST00000217890 450 ntBASIC11.02□□□□□ -0.65
Sox18P43680 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.02□□□□□ -0.65
Sox18P43680 AC173482.3-201ENSMUST00000225492 1212 ntBASIC11.02□□□□□ -0.65
Sox18P43680 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.02□□□□□ -0.65
Sox18P43680 AC131100.2-201ENSMUST00000227701 998 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox18P43680 Gm26437-201ENSMUST00000082595 105 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox18P43680 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox18P43680 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.02□□□□□ -0.65
Sox18P43680 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox18P43680 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox18P43680 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox18P43680 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.01□□□□□ -0.65
Sox18P43680 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sox18P43680 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox18P43680 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Gm26047-201ENSMUST00000157308 113 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Gm25971-201ENSMUST00000158953 286 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Gm5706-201ENSMUST00000181525 993 ntBASIC11.01□□□□□ -0.65
Sox18P43680 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox18P43680 Platr10-202ENSMUST00000191479 818 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Gm26047-202ENSMUST00000198840 115 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Gm7684-201ENSMUST00000211891 829 ntBASIC11.01□□□□□ -0.65
Sox18P43680 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.01□□□□□ -0.65
Sox18P43680 Gm9791-201ENSMUST00000060997 447 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms