Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL391825.1-201ENST00000457671 1364 ntBASIC15.86■□□□□ 0.13
TPM1P09493 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM1P09493 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM1P09493 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM1P09493 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 AP002761.4-201ENST00000565433 3361 ntBASIC15.86■□□□□ 0.13
TPM1P09493 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.86■□□□□ 0.13
TPM1P09493 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.85■□□□□ 0.13
TPM1P09493 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TPM1P09493 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM1P09493 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
TPM1P09493 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 AC073869.1-201ENST00000415574 2762 ntBASIC15.85■□□□□ 0.13
TPM1P09493 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM1P09493 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TPM1P09493 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TPM1P09493 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM1P09493 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.85■□□□□ 0.13
TPM1P09493 AC087499.6-201ENST00000411576 835 ntBASIC15.85■□□□□ 0.13
TPM1P09493 POM121L8P-201ENST00000417732 1281 ntBASIC15.85■□□□□ 0.13
TPM1P09493 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 POM121L9P-203ENST00000441984 1285 ntBASIC15.85■□□□□ 0.13
TPM1P09493 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM1P09493 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM1P09493 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM1P09493 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TPM1P09493 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM1P09493 AC104506.1-201ENST00000609247 429 ntBASIC15.85■□□□□ 0.13
TPM1P09493 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TPM1P09493 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TPM1P09493 KRT8P28-201ENST00000433288 1390 ntBASIC15.85■□□□□ 0.13
TPM1P09493 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM1P09493 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM1P09493 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TPM1P09493 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 LINC02486-201ENST00000604157 3000 ntBASIC15.84■□□□□ 0.13
TPM1P09493 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 AL391647.1-201ENST00000395664 511 ntBASIC15.84■□□□□ 0.13
TPM1P09493 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM1P09493 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 AC093214.1-201ENST00000511688 1107 ntBASIC15.84■□□□□ 0.13
TPM1P09493 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM1P09493 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM1P09493 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 AC009118.2-201ENST00000613275 655 ntBASIC15.84■□□□□ 0.13
TPM1P09493 AC093512.1-201ENST00000617969 520 ntBASIC15.84■□□□□ 0.13
TPM1P09493 CU634019.7-201ENST00000624153 1185 ntBASIC15.84■□□□□ 0.13
TPM1P09493 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 FP236241.2-201ENST00000624906 1185 ntBASIC15.84■□□□□ 0.13
TPM1P09493 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TPM1P09493 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms