Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Gm9133-201ENSMUST00000118289 540 ntBASIC13.48□□□□□ -0.25
NpcdF8VQB8 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Gm37723-201ENSMUST00000194480 565 ntBASIC13.48□□□□□ -0.25
NpcdF8VQB8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NpcdF8VQB8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.47□□□□□ -0.25
NpcdF8VQB8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.47□□□□□ -0.25
NpcdF8VQB8 Gm6758-201ENSMUST00000119643 1055 ntBASIC13.47□□□□□ -0.25
NpcdF8VQB8 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Gm18733-202ENSMUST00000174447 401 ntBASIC13.47□□□□□ -0.25
NpcdF8VQB8 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Gm18552-201ENSMUST00000187425 538 ntBASIC13.47□□□□□ -0.25
NpcdF8VQB8 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC13.47□□□□□ -0.25
NpcdF8VQB8 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NpcdF8VQB8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC13.46□□□□□ -0.25
NpcdF8VQB8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Gm24140-201ENSMUST00000122773 326 ntBASIC13.46□□□□□ -0.25
NpcdF8VQB8 Gm25288-201ENSMUST00000122800 265 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms