Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 KRT8P24-201ENST00000560290 1559 ntBASIC15.15■□□□□ 0.02
UBA3Q8TBC4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBA3Q8TBC4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 AC005840.4-201ENST00000541242 2494 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 AC011474.4-201ENST00000623523 2076 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 AC239868.1-201ENST00000369385 493 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 RPS9P1-201ENST00000419943 583 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 CALR4P-201ENST00000431943 946 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 AL022334.2-201ENST00000610000 484 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBA3Q8TBC4 AC041040.2-201ENST00000622926 2899 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 AC007952.5-201ENST00000572818 1486 ntBASIC15.14■□□□□ 0.01
UBA3Q8TBC4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 BRD7P5-201ENST00000299197 1822 ntBASIC15.13■□□□□ 0.01
UBA3Q8TBC4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 RN7SL530P-201ENST00000485097 298 ntBASIC15.13■□□□□ 0.01
UBA3Q8TBC4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
UBA3Q8TBC4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms