Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RFX5P48382 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RFX5P48382 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC17.31■□□□□ 0.36
RFX5P48382 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX5P48382 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.31■□□□□ 0.36
RFX5P48382 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.31■□□□□ 0.36
RFX5P48382 NUDT4P2-201ENST00000578341 546 ntBASIC17.31■□□□□ 0.36
RFX5P48382 RN7SL357P-201ENST00000581065 298 ntBASIC17.31■□□□□ 0.36
RFX5P48382 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.31■□□□□ 0.36
RFX5P48382 AC140113.1-201ENST00000603467 169 ntBASIC17.31■□□□□ 0.36
RFX5P48382 AL009176.1-201ENST00000607876 650 ntBASIC17.31■□□□□ 0.36
RFX5P48382 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 AL161773.1-201ENST00000624845 863 ntBASIC17.31■□□□□ 0.36
RFX5P48382 LINC00244-201ENST00000625073 613 ntBASIC17.31■□□□□ 0.36
RFX5P48382 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX5P48382 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX5P48382 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC17.31■□□□□ 0.36
RFX5P48382 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX5P48382 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RFX5P48382 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 PES1P2-201ENST00000449745 1735 ntBASIC17.3■□□□□ 0.36
RFX5P48382 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX5P48382 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 RPL17P11-201ENST00000417593 544 ntBASIC17.3■□□□□ 0.36
RFX5P48382 RN7SL767P-201ENST00000493013 295 ntBASIC17.3■□□□□ 0.36
RFX5P48382 PRSS3P1-201ENST00000503996 742 ntBASIC17.3■□□□□ 0.36
RFX5P48382 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX5P48382 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.3■□□□□ 0.36
RFX5P48382 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX5P48382 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
RFX5P48382 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX5P48382 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX5P48382 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX5P48382 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.29■□□□□ 0.36
RFX5P48382 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RFX5P48382 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.29■□□□□ 0.36
RFX5P48382 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RFX5P48382 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.29■□□□□ 0.36
RFX5P48382 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.29■□□□□ 0.36
RFX5P48382 AC025186.1-201ENST00000478174 870 ntBASIC17.29■□□□□ 0.36
RFX5P48382 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RFX5P48382 AP000322.3-201ENST00000608665 388 ntBASIC17.29■□□□□ 0.36
RFX5P48382 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.29■□□□□ 0.36
RFX5P48382 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFX5P48382 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX5P48382 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms