Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR602-201ENST00000384960 98 ntBASIC6.14□□□□□ -1.43
USH2AO75445 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 AC114812.4-201ENST00000506676 757 ntBASIC6.14□□□□□ -1.43
USH2AO75445 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 FTH1-205ENST00000529631 507 ntTSL 4 BASIC6.14□□□□□ -1.43
USH2AO75445 AC103810.4-201ENST00000578601 257 ntBASIC6.14□□□□□ -1.43
USH2AO75445 RN7SL624P-201ENST00000580297 278 ntBASIC6.14□□□□□ -1.43
USH2AO75445 AC005336.1-201ENST00000585431 1243 ntBASIC6.14□□□□□ -1.43
USH2AO75445 AC006547.1-207ENST00000601746 930 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 AC006547.1-210ENST00000609644 589 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 AC112693.3-201ENST00000624819 1983 ntBASIC6.14□□□□□ -1.43
USH2AO75445 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
USH2AO75445 PMF1-201ENST00000368273 884 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 RPSAP61-201ENST00000412542 878 ntBASIC6.14□□□□□ -1.43
USH2AO75445 AL049792.1-201ENST00000424708 1262 ntBASIC6.14□□□□□ -1.43
USH2AO75445 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
USH2AO75445 AC067942.1-202ENST00000471756 1057 ntBASIC6.14□□□□□ -1.43
USH2AO75445 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 AL355075.5-201ENST00000553568 890 ntBASIC6.14□□□□□ -1.43
USH2AO75445 MIR4309-201ENST00000582498 83 ntBASIC6.14□□□□□ -1.43
USH2AO75445 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 Z97653.2-201ENST00000623057 1418 ntBASIC6.14□□□□□ -1.43
USH2AO75445 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
USH2AO75445 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 SF1-209ENST00000433274 2317 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 AL513477.1-201ENST00000602865 2407 ntBASIC6.14□□□□□ -1.43
USH2AO75445 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 TPO-203ENST00000346956 2923 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 MIR345-201ENST00000362114 98 ntBASIC6.14□□□□□ -1.43
USH2AO75445 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 PGAM1P10-201ENST00000402426 761 ntBASIC6.14□□□□□ -1.43
USH2AO75445 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC6.14□□□□□ -1.43
USH2AO75445 AC006273.1-201ENST00000606966 861 ntBASIC6.14□□□□□ -1.43
USH2AO75445 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC6.14□□□□□ -1.43
USH2AO75445 GH2-205ENST00000622506 702 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC6.14□□□□□ -1.43
USH2AO75445 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC6.14□□□□□ -1.43
USH2AO75445 CD9-212ENST00000610354 1315 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 AC089987.2-201ENST00000328207 936 ntBASIC6.14□□□□□ -1.43
USH2AO75445 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 AC067942.2-201ENST00000506227 1268 ntBASIC6.14□□□□□ -1.43
USH2AO75445 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC6.14□□□□□ -1.43
USH2AO75445 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
USH2AO75445 AP006621.5-202ENST00000623692 636 ntBASIC6.14□□□□□ -1.43
USH2AO75445 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms