Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClcnkaQ9WUB7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ClcnkaQ9WUB7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClcnkaQ9WUB7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClcnkaQ9WUB7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClcnkaQ9WUB7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ClcnkaQ9WUB7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ClcnkaQ9WUB7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClcnkaQ9WUB7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ClcnkaQ9WUB7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ClcnkaQ9WUB7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClcnkaQ9WUB7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClcnkaQ9WUB7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClcnkaQ9WUB7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClcnkaQ9WUB7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClcnkaQ9WUB7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClcnkaQ9WUB7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClcnkaQ9WUB7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ClcnkaQ9WUB7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.52■□□□□ 0.56
ClcnkaQ9WUB7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ClcnkaQ9WUB7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClcnkaQ9WUB7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClcnkaQ9WUB7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
ClcnkaQ9WUB7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ClcnkaQ9WUB7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Gm22238-201ENSMUST00000175222 88 ntBASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClcnkaQ9WUB7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Gm7143-201ENSMUST00000222811 859 ntBASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClcnkaQ9WUB7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.49■□□□□ 0.55
ClcnkaQ9WUB7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
ClcnkaQ9WUB7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ClcnkaQ9WUB7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms