Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.85■□□□□ 0.61
LHX4Q969G2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LHX4Q969G2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX4Q969G2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LHX4Q969G2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
LHX4Q969G2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX4Q969G2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX4Q969G2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LHX4Q969G2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX4Q969G2 AC004448.1-201ENST00000458332 883 ntBASIC18.84■□□□□ 0.61
LHX4Q969G2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX4Q969G2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.84■□□□□ 0.61
LHX4Q969G2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.84■□□□□ 0.61
LHX4Q969G2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX4Q969G2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LHX4Q969G2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX4Q969G2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LHX4Q969G2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.83■□□□□ 0.61
LHX4Q969G2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LHX4Q969G2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX4Q969G2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.83■□□□□ 0.6
LHX4Q969G2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX4Q969G2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.83■□□□□ 0.6
LHX4Q969G2 MIR6722-201ENST00000617286 78 ntBASIC18.83■□□□□ 0.6
LHX4Q969G2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LHX4Q969G2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.83■□□□□ 0.6
LHX4Q969G2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
LHX4Q969G2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LHX4Q969G2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LHX4Q969G2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LHX4Q969G2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.82■□□□□ 0.6
LHX4Q969G2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LHX4Q969G2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.82■□□□□ 0.6
LHX4Q969G2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.82■□□□□ 0.6
LHX4Q969G2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.82■□□□□ 0.6
LHX4Q969G2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.82■□□□□ 0.6
LHX4Q969G2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LHX4Q969G2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LHX4Q969G2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LHX4Q969G2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LHX4Q969G2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LHX4Q969G2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
LHX4Q969G2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LHX4Q969G2 HLA-L-211ENST00000482052 1765 ntBASIC18.81■□□□□ 0.6
LHX4Q969G2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.81■□□□□ 0.6
LHX4Q969G2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.81■□□□□ 0.6
LHX4Q969G2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.81■□□□□ 0.6
LHX4Q969G2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.81■□□□□ 0.6
LHX4Q969G2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LHX4Q969G2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.81■□□□□ 0.6
LHX4Q969G2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.81■□□□□ 0.6
LHX4Q969G2 MIR3621-201ENST00000580529 85 ntBASIC18.81■□□□□ 0.6
LHX4Q969G2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.81■□□□□ 0.6
LHX4Q969G2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.81■□□□□ 0.6
LHX4Q969G2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LHX4Q969G2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LHX4Q969G2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX4Q969G2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LHX4Q969G2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LHX4Q969G2 AC131274.2-201ENST00000580697 1507 ntBASIC18.8■□□□□ 0.6
LHX4Q969G2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX4Q969G2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.8■□□□□ 0.6
LHX4Q969G2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LHX4Q969G2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.8■□□□□ 0.6
LHX4Q969G2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.8■□□□□ 0.6
LHX4Q969G2 PKD1P6-201ENST00000343738 4769 ntBASIC18.8■□□□□ 0.6
LHX4Q969G2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX4Q969G2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LHX4Q969G2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX4Q969G2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX4Q969G2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LHX4Q969G2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX4Q969G2 AL022069.1-201ENST00000568025 1636 ntBASIC18.79■□□□□ 0.6
LHX4Q969G2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX4Q969G2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LHX4Q969G2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.79■□□□□ 0.6
LHX4Q969G2 AC131281.2-201ENST00000520478 145 ntBASIC18.79■□□□□ 0.6
LHX4Q969G2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LHX4Q969G2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX4Q969G2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX4Q969G2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX4Q969G2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX4Q969G2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LHX4Q969G2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LHX4Q969G2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.78■□□□□ 0.6
LHX4Q969G2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.78■□□□□ 0.6
LHX4Q969G2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LHX4Q969G2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.78■□□□□ 0.6
LHX4Q969G2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 DUSP8P5-201ENST00000422884 1815 ntBASIC18.78■□□□□ 0.6
LHX4Q969G2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX4Q969G2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX4Q969G2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms