Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCRAQ6ISU1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCRAQ6ISU1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCRAQ6ISU1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCRAQ6ISU1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCRAQ6ISU1 AC006970.2-201ENST00000450065 779 ntBASIC23.65■■□□□ 1.38
PTCRAQ6ISU1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.65■■□□□ 1.38
PTCRAQ6ISU1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCRAQ6ISU1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCRAQ6ISU1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCRAQ6ISU1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCRAQ6ISU1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.64■■□□□ 1.37
PTCRAQ6ISU1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.64■■□□□ 1.37
PTCRAQ6ISU1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
PTCRAQ6ISU1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.64■■□□□ 1.37
PTCRAQ6ISU1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCRAQ6ISU1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.63■■□□□ 1.37
PTCRAQ6ISU1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.63■■□□□ 1.37
PTCRAQ6ISU1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.63■■□□□ 1.37
PTCRAQ6ISU1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.63■■□□□ 1.37
PTCRAQ6ISU1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PTCRAQ6ISU1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCRAQ6ISU1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCRAQ6ISU1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PTCRAQ6ISU1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.61■■□□□ 1.37
PTCRAQ6ISU1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCRAQ6ISU1 KRT18P61-201ENST00000585825 1298 ntBASIC23.61■■□□□ 1.37
PTCRAQ6ISU1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.61■■□□□ 1.37
PTCRAQ6ISU1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.6■■□□□ 1.37
PTCRAQ6ISU1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCRAQ6ISU1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.6■■□□□ 1.37
PTCRAQ6ISU1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCRAQ6ISU1 CD99P1-205ENST00000527459 561 ntBASIC23.6■■□□□ 1.37
PTCRAQ6ISU1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.6■■□□□ 1.37
PTCRAQ6ISU1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.6■■□□□ 1.37
PTCRAQ6ISU1 ERN1-208ENST00000606895 2068 ntBASIC23.6■■□□□ 1.37
PTCRAQ6ISU1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 AP005435.1-201ENST00000529293 1178 ntBASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 BID-214ENST00000617586 542 ntTSL 5 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PTCRAQ6ISU1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 AC141586.4-201ENST00000624558 1573 ntBASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 CROCCP5-201ENST00000436658 830 ntBASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PTCRAQ6ISU1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.57■■□□□ 1.36
PTCRAQ6ISU1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 NCF1B-203ENST00000435988 1254 ntBASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 TSPY20P-201ENST00000450910 630 ntBASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.56■■□□□ 1.36
PTCRAQ6ISU1 AC091060.1-201ENST00000623524 1766 ntBASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms