Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 DUSP8P5-201ENST00000422884 1815 ntBASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 AC092068.2-201ENST00000590491 1708 ntBASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN20Q4JDL3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 KRT16P3-201ENST00000439127 1283 ntBASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.83■■□□□ 1.41
PTPN20Q4JDL3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.83■■□□□ 1.4
PTPN20Q4JDL3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.82■■□□□ 1.4
PTPN20Q4JDL3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.81■■□□□ 1.4
PTPN20Q4JDL3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 MIR6724-1-201ENST00000616420 92 ntBASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 MIR6724-2-201ENST00000616483 92 ntBASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 MIR6724-4-201ENST00000617390 92 ntBASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 MIR6724-3-201ENST00000622482 92 ntBASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 AC079630.1-202ENST00000618127 1840 ntBASIC23.8■■□□□ 1.4
PTPN20Q4JDL3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN20Q4JDL3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPN20Q4JDL3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN20Q4JDL3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPN20Q4JDL3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PTPN20Q4JDL3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN20Q4JDL3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN20Q4JDL3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN20Q4JDL3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
PTPN20Q4JDL3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.77■■□□□ 1.4
PTPN20Q4JDL3 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms