Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 TRS85YDR108W 2097 nt4.04□□□□□ -1.76
UFD1P53044 DIT1YDR403W 1611 nt4.04□□□□□ -1.76
UFD1P53044 GCR2YNL199C 1605 nt4.04□□□□□ -1.76
UFD1P53044 YCR006CYCR006C 474 nt4.04□□□□□ -1.76
UFD1P53044 COQ4YDR204W 1008 nt4.04□□□□□ -1.76
UFD1P53044 ECM1YAL059W 639 nt4.04□□□□□ -1.76
UFD1P53044 YBL006W-AYBL006W-A 150 nt4.04□□□□□ -1.76
UFD1P53044 MAC1YMR021C 1254 nt4.04□□□□□ -1.76
UFD1P53044 RPC19YNL113W 429 nt4.04□□□□□ -1.76
UFD1P53044 ALG5YPL227C 1005 nt4.04□□□□□ -1.76
UFD1P53044 RRB1YMR131C 1536 nt4.04□□□□□ -1.76
UFD1P53044 SEN1YLR430W 6696 nt4.04□□□□□ -1.76
UFD1P53044 MRE11YMR224C 2079 nt4.04□□□□□ -1.76
UFD1P53044 YSH1YLR277C 2340 nt4.04□□□□□ -1.76
UFD1P53044 RKM2YDR198C 1440 nt4.04□□□□□ -1.76
UFD1P53044 RAD30YDR419W 1899 nt4.03□□□□□ -1.76
UFD1P53044 WTM1YOR230W 1314 nt4.03□□□□□ -1.76
UFD1P53044 GLE2YER107C 1098 nt4.03□□□□□ -1.76
UFD1P53044 RPL43BYJR094W-A 279 nt4.03□□□□□ -1.76
UFD1P53044 YAR019W-AYAR019W-A 333 nt4.03□□□□□ -1.76
UFD1P53044 ARC40YBR234C 1155 nt4.03□□□□□ -1.76
UFD1P53044 MLF3YNL074C 1359 nt4.02□□□□□ -1.77
UFD1P53044 ISR1YPR106W 1332 nt4.02□□□□□ -1.77
UFD1P53044 RTC5YOR118W 1704 nt4.02□□□□□ -1.77
UFD1P53044 YIR043CYIR043C 693 nt4.02□□□□□ -1.77
UFD1P53044 BUD17YNR027W 954 nt4.02□□□□□ -1.77
UFD1P53044 NOP8YOL144W 1455 nt4.02□□□□□ -1.77
UFD1P53044 SIS2YKR072C 1689 nt4.02□□□□□ -1.77
UFD1P53044 HUL4YJR036C 2679 nt4.02□□□□□ -1.77
UFD1P53044 IML2YJL082W 2196 nt4.02□□□□□ -1.77
UFD1P53044 NUP2YLR335W 2163 nt4.02□□□□□ -1.77
UFD1P53044 NUG1YER006W 1563 nt4.02□□□□□ -1.77
UFD1P53044 GSY1YFR015C 2127 nt4.01□□□□□ -1.77
UFD1P53044 YER158CYER158C 1722 nt4.01□□□□□ -1.77
UFD1P53044 YLR152CYLR152C 1731 nt4.01□□□□□ -1.77
UFD1P53044 GPI18YBR004C 1302 nt4.01□□□□□ -1.77
UFD1P53044 YDR545C-AYDR545C-A 480 nt4.01□□□□□ -1.77
UFD1P53044 YEL077W-AYEL077W-A 483 nt4.01□□□□□ -1.77
UFD1P53044 UBC6YER100W 753 nt4.01□□□□□ -1.77
UFD1P53044 YER190C-BYER190C-B 483 nt4.01□□□□□ -1.77
UFD1P53044 YFL068WYFL068W 483 nt4.01□□□□□ -1.77
UFD1P53044 YGR296C-BYGR296C-B 483 nt4.01□□□□□ -1.77
UFD1P53044 YHL050W-AYHL050W-A 483 nt4.01□□□□□ -1.77
UFD1P53044 DCD1YHR144C 939 nt4.01□□□□□ -1.77
UFD1P53044 YHR219C-AYHR219C-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YIL177W-AYIL177W-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YJL225W-AYJL225W-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YLL066W-AYLL066W-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YLL067W-AYLL067W-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YLR466C-AYLR466C-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YLR467C-AYLR467C-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YML133W-BYML133W-B 483 nt4.01□□□□□ -1.77
UFD1P53044 SLZ1YNL196C 897 nt4.01□□□□□ -1.77
UFD1P53044 CWC25YNL245C 540 nt4.01□□□□□ -1.77
UFD1P53044 YNL339W-BYNL339W-B 483 nt4.01□□□□□ -1.77
UFD1P53044 YBL113W-AYBL113W-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YBR016WYBR016W 387 nt4.01□□□□□ -1.77
UFD1P53044 YOR396C-AYOR396C-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YPL283W-BYPL283W-B 483 nt4.01□□□□□ -1.77
UFD1P53044 YPR204C-AYPR204C-A 483 nt4.01□□□□□ -1.77
UFD1P53044 YBR138CYBR138C 1575 nt4.01□□□□□ -1.77
UFD1P53044 HOS3YPL116W 2094 nt4.01□□□□□ -1.77
UFD1P53044 RAD28YDR030C 1521 nt4□□□□□ -1.77
UFD1P53044 EAR1YMR171C 1653 nt4□□□□□ -1.77
UFD1P53044 RCK2YLR248W 1833 nt4□□□□□ -1.77
UFD1P53044 YCR075W-AYCR075W-A 228 nt4□□□□□ -1.77
UFD1P53044 RPL8AYHL033C 771 nt4□□□□□ -1.77
UFD1P53044 OSW5YMR148W 447 nt4□□□□□ -1.77
UFD1P53044 YOL035CYOL035C 303 nt4□□□□□ -1.77
UFD1P53044 ARG8YOL140W 1272 nt4□□□□□ -1.77
UFD1P53044 DCS2YOR173W 1062 nt4□□□□□ -1.77
UFD1P53044 BUD7YOR299W 2241 nt4□□□□□ -1.77
UFD1P53044 ALD3YMR169C 1521 nt4□□□□□ -1.77
UFD1P53044 ALD2YMR170C 1521 nt4□□□□□ -1.77
UFD1P53044 APC4YDR118W 1959 nt4□□□□□ -1.77
UFD1P53044 ARH1YDR376W 1482 nt3.99□□□□□ -1.77
UFD1P53044 SPC42YKL042W 1092 nt3.99□□□□□ -1.77
UFD1P53044 MAP1YLR244C 1164 nt3.99□□□□□ -1.77
UFD1P53044 FEX1YOR390W 1128 nt3.99□□□□□ -1.77
UFD1P53044 YPL077CYPL077C 723 nt3.99□□□□□ -1.77
UFD1P53044 FEX2YPL279C 1128 nt3.99□□□□□ -1.77
UFD1P53044 TIP41YPR040W 1071 nt3.99□□□□□ -1.77
UFD1P53044 MCP2YLR253W 1710 nt3.98□□□□□ -1.77
UFD1P53044 TRE1YPL176C 2352 nt3.98□□□□□ -1.77
UFD1P53044 GCV1YDR019C 1203 nt3.98□□□□□ -1.77
UFD1P53044 YMR147WYMR147W 672 nt3.98□□□□□ -1.77
UFD1P53044 TOM40YMR203W 1164 nt3.98□□□□□ -1.77
UFD1P53044 PRE2YPR103W 864 nt3.98□□□□□ -1.77
UFD1P53044 YPR169W-AYPR169W-A 219 nt3.98□□□□□ -1.77
UFD1P53044 YPR170W-BYPR170W-B 258 nt3.98□□□□□ -1.77
UFD1P53044 LAP2YNL045W 2016 nt3.98□□□□□ -1.77
UFD1P53044 WHI4YDL224C 1950 nt3.98□□□□□ -1.77
UFD1P53044 IMA3YIL172C 1770 nt3.97□□□□□ -1.77
UFD1P53044 IMA4YJL221C 1770 nt3.97□□□□□ -1.77
UFD1P53044 PRD1YCL057W 2139 nt3.97□□□□□ -1.77
UFD1P53044 OLE1YGL055W 1533 nt3.97□□□□□ -1.77
UFD1P53044 CAB1YDR531W 1104 nt3.97□□□□□ -1.77
UFD1P53044 ECM15YBL001C 315 nt3.97□□□□□ -1.77
UFD1P53044 ATG33YLR356W 594 nt3.97□□□□□ -1.77
UFD1P53044 MRPL39YML009C 213 nt3.97□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms