Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YOR296WYOR296W 3870 nt6.17□□□□□ -1.42
TY1B-JR1P47098 RPA14YDR156W 414 nt6.17□□□□□ -1.42
TY1B-JR1P47098 BUB3YOR026W 1026 nt6.17□□□□□ -1.42
TY1B-JR1P47098 ARX1YDR101C 1782 nt6.17□□□□□ -1.42
TY1B-JR1P47098 ODC2YOR222W 924 nt6.16□□□□□ -1.42
TY1B-JR1P47098 VPS30YPL120W 1674 nt6.16□□□□□ -1.42
TY1B-JR1P47098 YJL193WYJL193W 1209 nt6.16□□□□□ -1.42
TY1B-JR1P47098 BRE4YDL231C 3378 nt6.15□□□□□ -1.42
TY1B-JR1P47098 GDA1YEL042W 1557 nt6.15□□□□□ -1.42
TY1B-JR1P47098 FDC1YDR539W 1512 nt6.15□□□□□ -1.42
TY1B-JR1P47098 snR7-SsnR7-S 179 nt6.15□□□□□ -1.43
TY1B-JR1P47098 FOB1YDR110W 1701 nt6.14□□□□□ -1.43
TY1B-JR1P47098 LSG1YGL099W 1923 nt6.14□□□□□ -1.43
TY1B-JR1P47098 HSP150YJL159W 1242 nt6.14□□□□□ -1.43
TY1B-JR1P47098 YGL185CYGL185C 1140 nt6.13□□□□□ -1.43
TY1B-JR1P47098 GIP2YER054C 1647 nt6.13□□□□□ -1.43
TY1B-JR1P47098 TKL1YPR074C 2043 nt6.13□□□□□ -1.43
TY1B-JR1P47098 DBP9YLR276C 1785 nt6.12□□□□□ -1.43
TY1B-JR1P47098 PCS60YBR222C 1632 nt6.12□□□□□ -1.43
TY1B-JR1P47098 KTR2YKR061W 1278 nt6.12□□□□□ -1.43
TY1B-JR1P47098 RPL22AYLR061W 366 nt6.12□□□□□ -1.43
TY1B-JR1P47098 snR17bsnR17b 332 nt6.12□□□□□ -1.43
TY1B-JR1P47098 HLJ1YMR161W 675 nt6.11□□□□□ -1.43
TY1B-JR1P47098 RPS19AYOL121C 435 nt6.11□□□□□ -1.43
TY1B-JR1P47098 IMA1YGR287C 1770 nt6.11□□□□□ -1.43
TY1B-JR1P47098 RPL24AYGL031C 468 nt6.11□□□□□ -1.43
TY1B-JR1P47098 MPS3YJL019W 2049 nt6.11□□□□□ -1.43
TY1B-JR1P47098 TVP38YKR088C 1014 nt6.11□□□□□ -1.43
TY1B-JR1P47098 RDL1YOR285W 420 nt6.11□□□□□ -1.43
TY1B-JR1P47098 YPR174CYPR174C 666 nt6.11□□□□□ -1.43
TY1B-JR1P47098 KIN3YAR018C 1308 nt6.1□□□□□ -1.43
TY1B-JR1P47098 JEN1YKL217W 1851 nt6.1□□□□□ -1.43
TY1B-JR1P47098 AAD3YCR107W 1092 nt6.1□□□□□ -1.43
TY1B-JR1P47098 EUG1YDR518W 1554 nt6.09□□□□□ -1.43
TY1B-JR1P47098 BSC1YDL037C 987 nt6.09□□□□□ -1.43
TY1B-JR1P47098 SUI1YNL244C 327 nt6.09□□□□□ -1.43
TY1B-JR1P47098 BMT2YBR141C 1014 nt6.09□□□□□ -1.43
TY1B-JR1P47098 LRG1YDL240W 3054 nt6.09□□□□□ -1.43
TY1B-JR1P47098 KRE6YPR159W 2163 nt6.09□□□□□ -1.43
TY1B-JR1P47098 HXT17YNR072W 1695 nt6.09□□□□□ -1.44
TY1B-JR1P47098 GTT1YIR038C 705 nt6.08□□□□□ -1.44
TY1B-JR1P47098 YIR007WYIR007W 2295 nt6.08□□□□□ -1.44
TY1B-JR1P47098 YIL077CYIL077C 963 nt6.08□□□□□ -1.44
TY1B-JR1P47098 SUA7YPR086W 1038 nt6.08□□□□□ -1.44
TY1B-JR1P47098 SSM4YIL030C 3960 nt6.07□□□□□ -1.44
TY1B-JR1P47098 THI13YDL244W 1023 nt6.06□□□□□ -1.44
TY1B-JR1P47098 THI11YJR156C 1023 nt6.06□□□□□ -1.44
TY1B-JR1P47098 YBR225WYBR225W 2703 nt6.06□□□□□ -1.44
TY1B-JR1P47098 LHP1YDL051W 828 nt6.06□□□□□ -1.44
TY1B-JR1P47098 RAD14YMR201C 1116 nt6.06□□□□□ -1.44
TY1B-JR1P47098 BBC1YJL020C 3474 nt6.04□□□□□ -1.44
TY1B-JR1P47098 DAL4YIR028W 1908 nt6.04□□□□□ -1.44
TY1B-JR1P47098 UBA1YKL210W 3075 nt6.04□□□□□ -1.44
TY1B-JR1P47098 RPO31YOR116C 4383 nt6.04□□□□□ -1.44
TY1B-JR1P47098 AXL2YIL140W 2472 nt6.04□□□□□ -1.44
TY1B-JR1P47098 PFK1YGR240C 2964 nt6.04□□□□□ -1.44
TY1B-JR1P47098 HIS5YIL116W 1158 nt6.03□□□□□ -1.44
TY1B-JR1P47098 YKR104WYKR104W 921 nt6.03□□□□□ -1.44
TY1B-JR1P47098 ASC1YMR116C 960 nt6.03□□□□□ -1.44
TY1B-JR1P47098 MET4YNL103W 2019 nt6.03□□□□□ -1.44
TY1B-JR1P47098 YER077CYER077C 2067 nt6.02□□□□□ -1.44
TY1B-JR1P47098 SSU1YPL092W 1377 nt6.02□□□□□ -1.45
TY1B-JR1P47098 VPS53YJL029C 2469 nt6.02□□□□□ -1.45
TY1B-JR1P47098 PCL10YGL134W 1302 nt6.01□□□□□ -1.45
TY1B-JR1P47098 YGR017WYGR017W 894 nt6.01□□□□□ -1.45
TY1B-JR1P47098 LDB19YOR322C 2457 nt6.01□□□□□ -1.45
TY1B-JR1P47098 HEM15YOR176W 1182 nt6.01□□□□□ -1.45
TY1B-JR1P47098 PUB1YNL016W 1362 nt6□□□□□ -1.45
TY1B-JR1P47098 YSF3YNL138W-A 258 nt6□□□□□ -1.45
TY1B-JR1P47098 GLO4YOR040W 858 nt6□□□□□ -1.45
TY1B-JR1P47098 MRH4YGL064C 1686 nt5.99□□□□□ -1.45
TY1B-JR1P47098 YAR030CYAR030C 342 nt5.99□□□□□ -1.45
TY1B-JR1P47098 YMR084WYMR084W 789 nt5.99□□□□□ -1.45
TY1B-JR1P47098 YPL077CYPL077C 723 nt5.99□□□□□ -1.45
TY1B-JR1P47098 YPR022CYPR022C 3402 nt5.99□□□□□ -1.45
TY1B-JR1P47098 BOP2YLR267W 1713 nt5.99□□□□□ -1.45
TY1B-JR1P47098 MMT1YMR177W 1533 nt5.99□□□□□ -1.45
TY1B-JR1P47098 FHL1YPR104C 2811 nt5.98□□□□□ -1.45
TY1B-JR1P47098 ELO2YCR034W 1044 nt5.98□□□□□ -1.45
TY1B-JR1P47098 SOD1YJR104C 465 nt5.98□□□□□ -1.45
TY1B-JR1P47098 DUG1YFR044C 1446 nt5.97□□□□□ -1.45
TY1B-JR1P47098 ROD1YOR018W 2514 nt5.97□□□□□ -1.45
TY1B-JR1P47098 MTC3YGL226W 372 nt5.97□□□□□ -1.45
TY1B-JR1P47098 APA2YDR530C 978 nt5.96□□□□□ -1.46
TY1B-JR1P47098 RPL19BYBL027W 570 nt5.96□□□□□ -1.46
TY1B-JR1P47098 PMA1YGL008C 2757 nt5.96□□□□□ -1.46
TY1B-JR1P47098 HSP104YLL026W 2727 nt5.96□□□□□ -1.46
TY1B-JR1P47098 PIR3YKL163W 978 nt5.95□□□□□ -1.46
TY1B-JR1P47098 OPY1YBR129C 987 nt5.95□□□□□ -1.46
TY1B-JR1P47098 NMT1YLR195C 1368 nt5.95□□□□□ -1.46
TY1B-JR1P47098 YEN1YER041W 2280 nt5.95□□□□□ -1.46
TY1B-JR1P47098 CLA4YNL298W 2529 nt5.95□□□□□ -1.46
TY1B-JR1P47098 MAG1YER142C 891 nt5.95□□□□□ -1.46
TY1B-JR1P47098 GUP2YPL189W 1830 nt5.94□□□□□ -1.46
TY1B-JR1P47098 RIP1YEL024W 648 nt5.94□□□□□ -1.46
TY1B-JR1P47098 CDC4YFL009W 2340 nt5.94□□□□□ -1.46
TY1B-JR1P47098 PBS2YJL128C 2007 nt5.94□□□□□ -1.46
TY1B-JR1P47098 NUP2YLR335W 2163 nt5.94□□□□□ -1.46
TY1B-JR1P47098 ARG4YHR018C 1392 nt5.93□□□□□ -1.46
TY1B-JR1P47098 YGR161W-CYGR161W-C 279 nt5.93□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms