Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a1P31648 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a1P31648 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.31■□□□□ 0.36
Slc6a1P31648 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.31■□□□□ 0.36
Slc6a1P31648 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc6a1P31648 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a1P31648 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.3■□□□□ 0.36
Slc6a1P31648 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a1P31648 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Slc6a1P31648 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a1P31648 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a1P31648 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a1P31648 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a1P31648 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a1P31648 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a1P31648 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc6a1P31648 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a1P31648 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Slc6a1P31648 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.29■□□□□ 0.36
Slc6a1P31648 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a1P31648 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a1P31648 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc6a1P31648 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a1P31648 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a1P31648 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.27■□□□□ 0.36
Slc6a1P31648 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a1P31648 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Slc6a1P31648 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a1P31648 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a1P31648 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.27■□□□□ 0.36
Slc6a1P31648 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a1P31648 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.27■□□□□ 0.36
Slc6a1P31648 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a1P31648 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a1P31648 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a1P31648 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a1P31648 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc6a1P31648 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a1P31648 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a1P31648 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a1P31648 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a1P31648 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Slc6a1P31648 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a1P31648 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a1P31648 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a1P31648 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc6a1P31648 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc6a1P31648 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a1P31648 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.23■□□□□ 0.35
Slc6a1P31648 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms