Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIR6084-201ENST00000622012 110 ntBASIC30.25■■■□□ 2.43
CSB-PGBD3P0DP91 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CSB-PGBD3P0DP91 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CSB-PGBD3P0DP91 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 AL358852.1-201ENST00000623174 1268 ntBASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CSB-PGBD3P0DP91 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CSB-PGBD3P0DP91 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC30.22■■■□□ 2.43
CSB-PGBD3P0DP91 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CSB-PGBD3P0DP91 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.22■■■□□ 2.43
CSB-PGBD3P0DP91 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CSB-PGBD3P0DP91 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.22■■■□□ 2.43
CSB-PGBD3P0DP91 AC141586.4-201ENST00000624558 1573 ntBASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 AC004911.1-201ENST00000416316 871 ntBASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CSB-PGBD3P0DP91 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CSB-PGBD3P0DP91 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.43
CSB-PGBD3P0DP91 AC027612.3-201ENST00000413684 1047 ntBASIC30.2■■■□□ 2.43
CSB-PGBD3P0DP91 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.2■■■□□ 2.43
CSB-PGBD3P0DP91 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CSB-PGBD3P0DP91 DUSP8P4-201ENST00000399538 1761 ntBASIC30.2■■■□□ 2.42
CSB-PGBD3P0DP91 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CSB-PGBD3P0DP91 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 IGHV3-19-201ENST00000521488 291 ntBASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 AL161729.1-201ENST00000604104 1402 ntBASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.19■■■□□ 2.42
CSB-PGBD3P0DP91 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 HLA-L-211ENST00000482052 1765 ntBASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 AC123595.1-201ENST00000440769 1046 ntBASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
CSB-PGBD3P0DP91 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
CSB-PGBD3P0DP91 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC30.17■■■□□ 2.42
CSB-PGBD3P0DP91 ALDH1A3-203ENST00000557963 1670 ntBASIC30.17■■■□□ 2.42
CSB-PGBD3P0DP91 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 MIR572-201ENST00000384983 95 ntBASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 AC012414.1-201ENST00000556676 535 ntBASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CSB-PGBD3P0DP91 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 GXYLT1P2-201ENST00000433312 1230 ntBASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
CSB-PGBD3P0DP91 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.14■■■□□ 2.42
CSB-PGBD3P0DP91 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.14■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms