Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Matn3O35701 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Matn3O35701 Gm11687-201ENSMUST00000118911 886 ntBASIC18.33■□□□□ 0.52
Matn3O35701 Gm9806-201ENSMUST00000051080 552 ntBASIC18.33■□□□□ 0.52
Matn3O35701 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Matn3O35701 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Matn3O35701 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Matn3O35701 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Matn3O35701 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Matn3O35701 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Matn3O35701 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Matn3O35701 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.32■□□□□ 0.52
Matn3O35701 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Matn3O35701 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.32■□□□□ 0.52
Matn3O35701 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Matn3O35701 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Matn3O35701 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Matn3O35701 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Matn3O35701 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Matn3O35701 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Matn3O35701 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Matn3O35701 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Matn3O35701 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.31■□□□□ 0.52
Matn3O35701 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Matn3O35701 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Matn3O35701 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Matn3O35701 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.31■□□□□ 0.52
Matn3O35701 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Matn3O35701 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Matn3O35701 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Matn3O35701 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Matn3O35701 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Matn3O35701 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Matn3O35701 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.3■□□□□ 0.52
Matn3O35701 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.3■□□□□ 0.52
Matn3O35701 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Matn3O35701 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Matn3O35701 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Matn3O35701 Golph3-205ENSMUST00000228671 2842 ntBASIC18.3■□□□□ 0.52
Matn3O35701 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Matn3O35701 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Matn3O35701 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Matn3O35701 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Matn3O35701 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Matn3O35701 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Matn3O35701 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Matn3O35701 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Matn3O35701 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Matn3O35701 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.28■□□□□ 0.52
Matn3O35701 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Matn3O35701 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Matn3O35701 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Matn3O35701 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Matn3O35701 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Matn3O35701 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Matn3O35701 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Matn3O35701 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Matn3O35701 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Matn3O35701 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Matn3O35701 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Matn3O35701 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Matn3O35701 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Matn3O35701 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Matn3O35701 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Matn3O35701 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.26■□□□□ 0.51
Matn3O35701 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.26■□□□□ 0.51
Matn3O35701 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.26■□□□□ 0.51
Matn3O35701 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Matn3O35701 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Matn3O35701 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Matn3O35701 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Matn3O35701 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.25■□□□□ 0.51
Matn3O35701 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.25■□□□□ 0.51
Matn3O35701 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Matn3O35701 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Matn3O35701 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Matn3O35701 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.24■□□□□ 0.51
Matn3O35701 Gm16437-201ENSMUST00000025669 507 ntBASIC18.24■□□□□ 0.51
Matn3O35701 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Matn3O35701 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Matn3O35701 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.23■□□□□ 0.51
Matn3O35701 Gm12366-201ENSMUST00000121722 873 ntBASIC18.23■□□□□ 0.51
Matn3O35701 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.23■□□□□ 0.51
Matn3O35701 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.23■□□□□ 0.51
Matn3O35701 Gm5786-201ENSMUST00000085368 882 ntBASIC18.23■□□□□ 0.51
Matn3O35701 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Matn3O35701 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.23■□□□□ 0.51
Matn3O35701 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Matn3O35701 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms