Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF223E7ERA6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.83■□□□□ 0.61
RNF223E7ERA6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF223E7ERA6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF223E7ERA6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF223E7ERA6 MIR6084-201ENST00000622012 110 ntBASIC18.83■□□□□ 0.6
RNF223E7ERA6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF223E7ERA6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF223E7ERA6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF223E7ERA6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF223E7ERA6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF223E7ERA6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF223E7ERA6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.82■□□□□ 0.6
RNF223E7ERA6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.82■□□□□ 0.6
RNF223E7ERA6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF223E7ERA6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF223E7ERA6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF223E7ERA6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.81■□□□□ 0.6
RNF223E7ERA6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.81■□□□□ 0.6
RNF223E7ERA6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF223E7ERA6 AC027612.3-201ENST00000413684 1047 ntBASIC18.81■□□□□ 0.6
RNF223E7ERA6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF223E7ERA6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF223E7ERA6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF223E7ERA6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF223E7ERA6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF223E7ERA6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF223E7ERA6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF223E7ERA6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF223E7ERA6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF223E7ERA6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF223E7ERA6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RNF223E7ERA6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF223E7ERA6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF223E7ERA6 AC123595.1-201ENST00000440769 1046 ntBASIC18.8■□□□□ 0.6
RNF223E7ERA6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF223E7ERA6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF223E7ERA6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
RNF223E7ERA6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF223E7ERA6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF223E7ERA6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF223E7ERA6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF223E7ERA6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF223E7ERA6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF223E7ERA6 IGHV3-19-201ENST00000521488 291 ntBASIC18.79■□□□□ 0.6
RNF223E7ERA6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF223E7ERA6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF223E7ERA6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF223E7ERA6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF223E7ERA6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF223E7ERA6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF223E7ERA6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF223E7ERA6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF223E7ERA6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF223E7ERA6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF223E7ERA6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF223E7ERA6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF223E7ERA6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF223E7ERA6 AC141586.4-201ENST00000624558 1573 ntBASIC18.77■□□□□ 0.6
RNF223E7ERA6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF223E7ERA6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF223E7ERA6 MIR572-201ENST00000384983 95 ntBASIC18.77■□□□□ 0.6
RNF223E7ERA6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF223E7ERA6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF223E7ERA6 AC012414.1-201ENST00000556676 535 ntBASIC18.77■□□□□ 0.6
RNF223E7ERA6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF223E7ERA6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF223E7ERA6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
RNF223E7ERA6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.77■□□□□ 0.59
RNF223E7ERA6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF223E7ERA6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF223E7ERA6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF223E7ERA6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF223E7ERA6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 ID1-201ENST00000376105 1233 ntBASIC18.76■□□□□ 0.59
RNF223E7ERA6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF223E7ERA6 CCDC92B-201ENST00000575506 885 ntBASIC18.76■□□□□ 0.59
RNF223E7ERA6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 AL121749.1-202ENST00000609313 2153 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms