Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC31.07■■■□□ 2.56
SBNO1A3KN83 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SBNO1A3KN83 AC091060.1-201ENST00000623524 1766 ntBASIC31.07■■■□□ 2.56
SBNO1A3KN83 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SBNO1A3KN83 VPS53-216ENST00000574029 585 ntTSL 4 BASIC31.06■■■□□ 2.56
SBNO1A3KN83 CCDC92B-201ENST00000575506 885 ntBASIC31.06■■■□□ 2.56
SBNO1A3KN83 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SBNO1A3KN83 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC31.06■■■□□ 2.56
SBNO1A3KN83 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SBNO1A3KN83 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SBNO1A3KN83 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC31.05■■■□□ 2.56
SBNO1A3KN83 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SBNO1A3KN83 AL354811.1-201ENST00000610286 706 ntBASIC31.05■■■□□ 2.56
SBNO1A3KN83 MIR6084-201ENST00000622012 110 ntBASIC31.05■■■□□ 2.56
SBNO1A3KN83 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SBNO1A3KN83 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
SBNO1A3KN83 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
SBNO1A3KN83 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SBNO1A3KN83 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC31.04■■■□□ 2.56
SBNO1A3KN83 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SBNO1A3KN83 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SBNO1A3KN83 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SBNO1A3KN83 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC31.03■■■□□ 2.56
SBNO1A3KN83 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SBNO1A3KN83 AC145676.1-201ENST00000514988 2004 ntBASIC31.03■■■□□ 2.56
SBNO1A3KN83 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.02■■■□□ 2.56
SBNO1A3KN83 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SBNO1A3KN83 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SBNO1A3KN83 ME3-201ENST00000323418 1068 ntTSL 5 BASIC31.02■■■□□ 2.56
SBNO1A3KN83 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.02■■■□□ 2.56
SBNO1A3KN83 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
SBNO1A3KN83 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
SBNO1A3KN83 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC31.01■■■□□ 2.55
SBNO1A3KN83 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC31.01■■■□□ 2.55
SBNO1A3KN83 TERF1P2-201ENST00000583350 1212 ntBASIC31.01■■■□□ 2.55
SBNO1A3KN83 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC31.01■■■□□ 2.55
SBNO1A3KN83 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
SBNO1A3KN83 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SBNO1A3KN83 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SBNO1A3KN83 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31■■■□□ 2.55
SBNO1A3KN83 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31■■■□□ 2.55
SBNO1A3KN83 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SBNO1A3KN83 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC31■■■□□ 2.55
SBNO1A3KN83 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC31■■■□□ 2.55
SBNO1A3KN83 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SBNO1A3KN83 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.99■■■□□ 2.55
SBNO1A3KN83 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.99■■■□□ 2.55
SBNO1A3KN83 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.99■■■□□ 2.55
SBNO1A3KN83 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SBNO1A3KN83 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
SBNO1A3KN83 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SBNO1A3KN83 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SBNO1A3KN83 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SBNO1A3KN83 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SBNO1A3KN83 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SBNO1A3KN83 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SBNO1A3KN83 AC141586.4-201ENST00000624558 1573 ntBASIC30.98■■■□□ 2.55
SBNO1A3KN83 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC30.98■■■□□ 2.55
SBNO1A3KN83 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
SBNO1A3KN83 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.97■■■□□ 2.55
SBNO1A3KN83 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.97■■■□□ 2.55
SBNO1A3KN83 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
SBNO1A3KN83 AL161729.1-201ENST00000604104 1402 ntBASIC30.97■■■□□ 2.55
SBNO1A3KN83 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SBNO1A3KN83 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.97■■■□□ 2.55
SBNO1A3KN83 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
SBNO1A3KN83 KRT18P14-201ENST00000534205 1250 ntBASIC30.97■■■□□ 2.55
SBNO1A3KN83 USF2-207ENST00000595068 1612 ntTSL 5 BASIC30.96■■■□□ 2.55
SBNO1A3KN83 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SBNO1A3KN83 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.96■■■□□ 2.55
SBNO1A3KN83 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SBNO1A3KN83 NTF6G-201ENST00000591094 616 ntBASIC30.96■■■□□ 2.55
SBNO1A3KN83 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
SBNO1A3KN83 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SBNO1A3KN83 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
SBNO1A3KN83 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
SBNO1A3KN83 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
SBNO1A3KN83 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SBNO1A3KN83 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SBNO1A3KN83 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SBNO1A3KN83 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SBNO1A3KN83 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
SBNO1A3KN83 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms