Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 FAM187B2P-201ENST00000577135 713 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC126177.1-201ENST00000547829 2218 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC140479.7-201ENST00000636301 2332 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 CDC37P2-201ENST00000562287 1029 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC117489.1-201ENST00000625169 3217 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC046158.3-201ENST00000624947 2558 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 MT3-202ENST00000561640 514 ntTSL 3 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AL009176.1-201ENST00000607876 650 ntBASIC11.5□□□□□ -0.57
VPS13CQ709C8 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AC005722.1-201ENST00000431878 964 ntBASIC11.5□□□□□ -0.57
VPS13CQ709C8 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SAP18P2-201ENST00000434334 459 ntBASIC11.5□□□□□ -0.57
VPS13CQ709C8 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 AC004801.1-201ENST00000549557 360 ntBASIC11.5□□□□□ -0.57
VPS13CQ709C8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 RN7SL524P-201ENST00000581152 300 ntBASIC11.5□□□□□ -0.57
VPS13CQ709C8 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 GARS-210ENST00000627489 324 ntTSL 4 BASIC11.5□□□□□ -0.57
VPS13CQ709C8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13CQ709C8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms