Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.88■□□□□ 0.29
TOP1P11387 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.88■□□□□ 0.29
TOP1P11387 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 AC092580.1-201ENST00000433998 658 ntBASIC16.88■□□□□ 0.29
TOP1P11387 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.88■□□□□ 0.29
TOP1P11387 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.88■□□□□ 0.29
TOP1P11387 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.88■□□□□ 0.29
TOP1P11387 RN7SL769P-201ENST00000469386 295 ntBASIC16.88■□□□□ 0.29
TOP1P11387 IMP3P2-201ENST00000489760 475 ntBASIC16.88■□□□□ 0.29
TOP1P11387 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.88■□□□□ 0.29
TOP1P11387 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 AC140658.4-201ENST00000561990 352 ntBASIC16.88■□□□□ 0.29
TOP1P11387 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.88■□□□□ 0.29
TOP1P11387 AC106872.11-201ENST00000605838 421 ntBASIC16.88■□□□□ 0.29
TOP1P11387 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.88■□□□□ 0.29
TOP1P11387 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.87■□□□□ 0.29
TOP1P11387 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TOP1P11387 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 RNA5SP359-201ENST00000364838 113 ntBASIC16.87■□□□□ 0.29
TOP1P11387 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.87■□□□□ 0.29
TOP1P11387 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 AC105129.2-201ENST00000559536 390 ntBASIC16.87■□□□□ 0.29
TOP1P11387 FGFR3P5-201ENST00000564496 886 ntBASIC16.87■□□□□ 0.29
TOP1P11387 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 MIR4754-201ENST00000582477 89 ntBASIC16.87■□□□□ 0.29
TOP1P11387 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 AC068587.10-201ENST00000641210 219 ntBASIC16.87■□□□□ 0.29
TOP1P11387 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TOP1P11387 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TOP1P11387 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.87■□□□□ 0.29
TOP1P11387 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP1P11387 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.87■□□□□ 0.29
TOP1P11387 AC015909.3-201ENST00000572855 1794 ntBASIC16.87■□□□□ 0.29
TOP1P11387 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP1P11387 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TOP1P11387 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TOP1P11387 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP1P11387 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TOP1P11387 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms