Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
THBS1P07996 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.3□□□□□ -0.28
THBS1P07996 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.3□□□□□ -0.28
THBS1P07996 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
THBS1P07996 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
THBS1P07996 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
THBS1P07996 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.3□□□□□ -0.28
THBS1P07996 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
THBS1P07996 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS1P07996 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.3□□□□□ -0.28
THBS1P07996 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS1P07996 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 CSF2RBP1-201ENST00000447905 391 ntBASIC13.3□□□□□ -0.28
THBS1P07996 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
THBS1P07996 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.3□□□□□ -0.28
THBS1P07996 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.3□□□□□ -0.28
THBS1P07996 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC13.3□□□□□ -0.28
THBS1P07996 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS1P07996 MIR6869-201ENST00000619434 62 ntBASIC13.3□□□□□ -0.28
THBS1P07996 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 Z98259.2-201ENST00000641583 609 ntBASIC13.3□□□□□ -0.28
THBS1P07996 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
THBS1P07996 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 AL137784.3-201ENST00000623858 2288 ntBASIC13.3□□□□□ -0.28
THBS1P07996 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
THBS1P07996 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.3□□□□□ -0.28
THBS1P07996 AGAP10P-201ENST00000454844 2418 ntBASIC13.3□□□□□ -0.28
THBS1P07996 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.3□□□□□ -0.28
THBS1P07996 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
THBS1P07996 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 AC040160.2-201ENST00000623816 1675 ntBASIC13.29□□□□□ -0.28
THBS1P07996 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.29□□□□□ -0.28
THBS1P07996 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
THBS1P07996 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.29□□□□□ -0.28
THBS1P07996 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.29□□□□□ -0.28
THBS1P07996 KRT18P15-201ENST00000458108 1291 ntBASIC13.29□□□□□ -0.28
THBS1P07996 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.29□□□□□ -0.28
THBS1P07996 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.29□□□□□ -0.28
THBS1P07996 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.29□□□□□ -0.28
THBS1P07996 AC124068.2-201ENST00000569473 1109 ntBASIC13.29□□□□□ -0.28
THBS1P07996 MIR4783-201ENST00000580343 82 ntBASIC13.29□□□□□ -0.28
THBS1P07996 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.29□□□□□ -0.28
THBS1P07996 AL133445.2-201ENST00000611191 527 ntBASIC13.29□□□□□ -0.28
THBS1P07996 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 AC090386.2-201ENST00000623010 1039 ntBASIC13.29□□□□□ -0.28
THBS1P07996 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.29□□□□□ -0.28
THBS1P07996 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms