Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 ACTG1P2-201ENST00000415776 1125 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 ACTG1P11-201ENST00000425411 1125 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 AC011742.3-201ENST00000439053 820 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 IGHJ2P-201ENST00000454480 60 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 AC125604.1-201ENST00000496255 707 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 RN7SL774P-201ENST00000577467 290 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 AL132994.2-201ENST00000603120 687 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 AP000346.4-201ENST00000614827 381 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 AC091544.8-201ENST00000619490 361 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 MYADML-201ENST00000474610 2147 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 MIR600HG-201ENST00000449175 5984 ntBASIC15.07■□□□□ 0
RFWD3Q6PCD5 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD3Q6PCD5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.07■□□□□ 0
RFWD3Q6PCD5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AL359881.3-201ENST00000602640 1721 ntBASIC15.06■□□□□ 0
RFWD3Q6PCD5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.06■□□□□ 0
RFWD3Q6PCD5 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.06■□□□□ 0
RFWD3Q6PCD5 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 RCC2P8-201ENST00000502779 1035 ntBASIC15.06■□□□□ 0
RFWD3Q6PCD5 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AC022447.6-201ENST00000515522 438 ntBASIC15.06■□□□□ 0
RFWD3Q6PCD5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AL021578.1-201ENST00000613646 709 ntBASIC15.06■□□□□ 0
RFWD3Q6PCD5 AC133540.1-201ENST00000620845 1019 ntBASIC15.06■□□□□ 0
RFWD3Q6PCD5 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AL805961.1-203ENST00000641078 1258 ntBASIC15.06■□□□□ 0
RFWD3Q6PCD5 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.06■□□□□ 0
RFWD3Q6PCD5 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD3Q6PCD5 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms