Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
YBX1P67809 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
YBX1P67809 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 DPM3-202ENST00000368399 517 ntBASIC14.04□□□□□ -0.16
YBX1P67809 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.04□□□□□ -0.16
YBX1P67809 SERPINA13P-202ENST00000478994 924 ntBASIC14.04□□□□□ -0.16
YBX1P67809 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.04□□□□□ -0.16
YBX1P67809 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 AC008805.1-201ENST00000590892 364 ntBASIC14.04□□□□□ -0.16
YBX1P67809 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.04□□□□□ -0.16
YBX1P67809 AC243960.2-201ENST00000600996 747 ntBASIC14.04□□□□□ -0.16
YBX1P67809 AC084346.2-201ENST00000607097 949 ntBASIC14.04□□□□□ -0.16
YBX1P67809 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.04□□□□□ -0.16
YBX1P67809 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.04□□□□□ -0.16
YBX1P67809 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.04□□□□□ -0.16
YBX1P67809 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
YBX1P67809 FAM90A7P-201ENST00000382628 1395 ntBASIC14.04□□□□□ -0.16
YBX1P67809 FAM90A23P-201ENST00000400136 1395 ntBASIC14.04□□□□□ -0.16
YBX1P67809 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 AC004241.5-201ENST00000623870 2448 ntBASIC14.04□□□□□ -0.16
YBX1P67809 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
YBX1P67809 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
YBX1P67809 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 AC068760.1-201ENST00000493579 1953 ntBASIC14.03□□□□□ -0.16
YBX1P67809 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.03□□□□□ -0.16
YBX1P67809 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.03□□□□□ -0.16
YBX1P67809 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
YBX1P67809 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 AL365181.3-201ENST00000605886 3222 ntBASIC14.03□□□□□ -0.16
YBX1P67809 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.03□□□□□ -0.16
YBX1P67809 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.03□□□□□ -0.16
YBX1P67809 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.03□□□□□ -0.16
YBX1P67809 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.03□□□□□ -0.16
YBX1P67809 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
YBX1P67809 AC006033.1-201ENST00000440505 426 ntBASIC14.03□□□□□ -0.16
YBX1P67809 AC012441.2-201ENST00000444843 739 ntBASIC14.03□□□□□ -0.16
YBX1P67809 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.03□□□□□ -0.16
YBX1P67809 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.03□□□□□ -0.16
YBX1P67809 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 AC006122.1-201ENST00000493323 440 ntBASIC14.03□□□□□ -0.16
YBX1P67809 HLA-J-204ENST00000495278 958 ntBASIC14.03□□□□□ -0.16
YBX1P67809 AC126915.1-201ENST00000522847 1038 ntBASIC14.03□□□□□ -0.16
YBX1P67809 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.03□□□□□ -0.16
YBX1P67809 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 RBM8B-201ENST00000555532 525 ntBASIC14.03□□□□□ -0.16
YBX1P67809 AC027237.1-201ENST00000560942 655 ntBASIC14.03□□□□□ -0.16
YBX1P67809 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.03□□□□□ -0.16
YBX1P67809 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.03□□□□□ -0.16
YBX1P67809 AC068587.8-201ENST00000641239 219 ntBASIC14.03□□□□□ -0.16
YBX1P67809 AC004923.1-202ENST00000642106 209 ntBASIC14.03□□□□□ -0.16
YBX1P67809 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.03□□□□□ -0.16
YBX1P67809 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
YBX1P67809 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
YBX1P67809 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
YBX1P67809 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.03□□□□□ -0.16
YBX1P67809 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms