Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC139712.1-201ENST00000378256 1875 ntBASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 F10-203ENST00000409306 1450 ntTSL 3 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC112492.5-201ENST00000421897 457 ntBASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AL355994.2-201ENST00000447882 704 ntBASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC023310.1-201ENST00000554836 735 ntBASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AC073413.1-201ENST00000603927 732 ntBASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 MIR6074-201ENST00000612054 107 ntBASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
HLA-DRB4X5D2U9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AL590440.2-201ENST00000641973 1595 ntBASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 NUTM2HP-201ENST00000442076 2498 ntBASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CTBP2P5-201ENST00000454986 1264 ntBASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 GPR53P-205ENST00000457298 1084 ntBASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AC103988.2-201ENST00000561804 725 ntBASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AC008825.2-201ENST00000603374 718 ntBASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 AL512343.1-201ENST00000605837 169 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms