Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 AC144522.1-201ENST00000625111 1658 ntBASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 GOLGA2P4-201ENST00000441462 777 ntBASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 MIR6752-201ENST00000618442 71 ntBASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 AL591471.1-201ENST00000621855 229 ntBASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 HSPA8P5-201ENST00000456928 2069 ntBASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.82□□□□□ -0.2
SRFBP1Q8NEF9 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 LAP3P2-201ENST00000454686 1454 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 USP17L6P-201ENST00000382470 1197 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 PFN1P12-201ENST00000455938 534 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AL160314.3-201ENST00000556041 767 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC140658.4-201ENST00000561990 352 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC124068.2-201ENST00000569473 1109 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC104982.3-201ENST00000581995 514 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC005962.1-201ENST00000584100 773 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC007663.3-201ENST00000609632 465 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AL096828.3-201ENST00000615354 462 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC016397.2-201ENST00000624848 1985 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC012617.1-204ENST00000586340 2305 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms