Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.23□□□□□ -0.45
SSBP1Q04837 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.23□□□□□ -0.45
SSBP1Q04837 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.23□□□□□ -0.45
SSBP1Q04837 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.23□□□□□ -0.45
SSBP1Q04837 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 INE1-201ENST00000456273 945 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 MESTP3-201ENST00000503460 968 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 AP001582.1-201ENST00000525856 295 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.23□□□□□ -0.45
SSBP1Q04837 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.23□□□□□ -0.45
SSBP1Q04837 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.23□□□□□ -0.45
SSBP1Q04837 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP1Q04837 AC120114.3-201ENST00000611923 658 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 AP005019.2-201ENST00000615104 511 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.23□□□□□ -0.45
SSBP1Q04837 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSBP1Q04837 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SSBP1Q04837 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP1Q04837 AL118506.1-201ENST00000601296 3082 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
SSBP1Q04837 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP1Q04837 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SSBP1Q04837 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 AC061965.1-201ENST00000560524 1465 ntBASIC12.22□□□□□ -0.45
SSBP1Q04837 AC004623.1-201ENST00000624592 2127 ntBASIC12.22□□□□□ -0.45
SSBP1Q04837 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 AC134915.1-201ENST00000426461 574 ntBASIC12.22□□□□□ -0.45
SSBP1Q04837 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.22□□□□□ -0.45
SSBP1Q04837 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP1Q04837 DNAJB3-201ENST00000446806 729 ntBASIC12.22□□□□□ -0.45
SSBP1Q04837 KRT18P15-201ENST00000458108 1291 ntBASIC12.22□□□□□ -0.45
SSBP1Q04837 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP1Q04837 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP1Q04837 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.22□□□□□ -0.45
SSBP1Q04837 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.22□□□□□ -0.45
SSBP1Q04837 AC004466.1-201ENST00000599515 1080 ntBASIC12.22□□□□□ -0.45
SSBP1Q04837 SRD5A3P1-201ENST00000603021 949 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms