Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 CD44-224ENST00000526669 870 ntTSL 5 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 PES1P2-201ENST00000449745 1735 ntBASIC20.98■□□□□ 0.95
RAPGEF3O95398 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 MIR1307-201ENST00000408840 149 ntBASIC20.97■□□□□ 0.95
RAPGEF3O95398 AC104212.2-201ENST00000478813 628 ntBASIC20.97■□□□□ 0.95
RAPGEF3O95398 PHBP18-201ENST00000546648 813 ntBASIC20.97■□□□□ 0.95
RAPGEF3O95398 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 AC026120.2-201ENST00000617239 309 ntBASIC20.97■□□□□ 0.95
RAPGEF3O95398 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC20.97■□□□□ 0.95
RAPGEF3O95398 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC20.97■□□□□ 0.95
RAPGEF3O95398 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF3O95398 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF3O95398 AC084018.2-201ENST00000613093 2607 ntBASIC20.96■□□□□ 0.95
RAPGEF3O95398 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF3O95398 AL354702.1-201ENST00000442006 1960 ntBASIC20.96■□□□□ 0.95
RAPGEF3O95398 DOC2GP-204ENST00000639052 2548 ntBASIC20.96■□□□□ 0.95
RAPGEF3O95398 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 HSD3BP1-201ENST00000286193 1111 ntBASIC20.96■□□□□ 0.95
RAPGEF3O95398 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 CRIP1P2-201ENST00000425396 228 ntBASIC20.96■□□□□ 0.95
RAPGEF3O95398 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 TMA16-204ENST00000508268 608 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 CCNL2P1-201ENST00000512846 969 ntBASIC20.96■□□□□ 0.95
RAPGEF3O95398 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 MST1L-204ENST00000545160 559 ntTSL 4 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 RPS5-205ENST00000598495 800 ntTSL 3 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 AC018529.2-202ENST00000611482 3087 ntBASIC20.96■□□□□ 0.95
RAPGEF3O95398 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF3O95398 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF3O95398 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF3O95398 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF3O95398 USP39-220ENST00000613444 2161 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF3O95398 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF3O95398 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 CFL1P6-201ENST00000400899 494 ntBASIC20.95■□□□□ 0.94
RAPGEF3O95398 TUBB2BP1-201ENST00000404155 871 ntBASIC20.95■□□□□ 0.94
RAPGEF3O95398 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 PCTP-206ENST00000573500 919 ntTSL 3 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms