Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AC015688.4-201ENST00000580780 1647 ntBASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AC020658.7-201ENST00000624274 2442 ntBASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 TLE1P1-201ENST00000422965 589 ntBASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AC007969.1-201ENST00000433675 447 ntBASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 RN7SL752P-201ENST00000463779 287 ntBASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AC011495.1-201ENST00000498085 584 ntBASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTN4IP1Q8WWV3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 ACTG1P3-201ENST00000431775 1114 ntBASIC12.25□□□□□ -0.45
RTN4IP1Q8WWV3 EIF3FP3-201ENST00000434851 1086 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms