Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CASP9P55211 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
CASP9P55211 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CASP9P55211 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CASP9P55211 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.76□□□□□ -0.21
CASP9P55211 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
CASP9P55211 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.76□□□□□ -0.21
CASP9P55211 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 FAM197Y7-201ENST00000432892 766 ntBASIC13.76□□□□□ -0.21
CASP9P55211 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.76□□□□□ -0.21
CASP9P55211 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.76□□□□□ -0.21
CASP9P55211 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 INE1-201ENST00000456273 945 ntBASIC13.76□□□□□ -0.21
CASP9P55211 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.76□□□□□ -0.21
CASP9P55211 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.76□□□□□ -0.21
CASP9P55211 AL596325.1-201ENST00000563991 1082 ntBASIC13.76□□□□□ -0.21
CASP9P55211 AC025279.2-201ENST00000569730 653 ntBASIC13.76□□□□□ -0.21
CASP9P55211 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.76□□□□□ -0.21
CASP9P55211 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.76□□□□□ -0.21
CASP9P55211 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 PEG13-201ENST00000631594 5667 ntBASIC13.76□□□□□ -0.21
CASP9P55211 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CASP9P55211 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
CASP9P55211 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.76□□□□□ -0.21
CASP9P55211 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CASP9P55211 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CASP9P55211 AP000593.2-201ENST00000542775 1433 ntBASIC13.75□□□□□ -0.21
CASP9P55211 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CASP9P55211 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CASP9P55211 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.75□□□□□ -0.21
CASP9P55211 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.75□□□□□ -0.21
CASP9P55211 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.75□□□□□ -0.21
CASP9P55211 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.75□□□□□ -0.21
CASP9P55211 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CASP9P55211 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.75□□□□□ -0.21
CASP9P55211 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.75□□□□□ -0.21
CASP9P55211 NME2P1-201ENST00000426182 414 ntBASIC13.75□□□□□ -0.21
CASP9P55211 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP9P55211 PUDPP3-201ENST00000445368 636 ntBASIC13.75□□□□□ -0.21
CASP9P55211 FTH1P14-201ENST00000482930 551 ntBASIC13.75□□□□□ -0.21
CASP9P55211 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.75□□□□□ -0.21
CASP9P55211 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.75□□□□□ -0.21
CASP9P55211 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.75□□□□□ -0.21
CASP9P55211 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.75□□□□□ -0.21
CASP9P55211 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms