Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.14■□□□□ 0.01
RB1P06400 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RB1P06400 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.13■□□□□ 0.01
RB1P06400 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.13■□□□□ 0.01
RB1P06400 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RB1P06400 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.13■□□□□ 0.01
RB1P06400 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 OR52M2P-201ENST00000414298 959 ntBASIC15.13■□□□□ 0.01
RB1P06400 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.13■□□□□ 0.01
RB1P06400 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.13■□□□□ 0.01
RB1P06400 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
RB1P06400 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.13■□□□□ 0.01
RB1P06400 CES1P2-201ENST00000566467 1242 ntBASIC15.13■□□□□ 0.01
RB1P06400 AC005777.1-201ENST00000588332 187 ntBASIC15.13■□□□□ 0.01
RB1P06400 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.13■□□□□ 0.01
RB1P06400 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RB1P06400 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RB1P06400 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RB1P06400 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RB1P06400 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RB1P06400 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RB1P06400 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RB1P06400 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RB1P06400 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
RB1P06400 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.13■□□□□ 0.01
RB1P06400 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.13■□□□□ 0.01
RB1P06400 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RB1P06400 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.12■□□□□ 0.01
RB1P06400 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RB1P06400 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.12■□□□□ 0.01
RB1P06400 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.12■□□□□ 0.01
RB1P06400 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 KRT18P4-201ENST00000422599 1288 ntBASIC15.12■□□□□ 0.01
RB1P06400 PSAT1P2-201ENST00000426107 972 ntBASIC15.12■□□□□ 0.01
RB1P06400 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.12■□□□□ 0.01
RB1P06400 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RB1P06400 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.12■□□□□ 0.01
RB1P06400 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.12■□□□□ 0.01
RB1P06400 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.12■□□□□ 0.01
RB1P06400 AL160191.2-201ENST00000603975 601 ntBASIC15.12■□□□□ 0.01
RB1P06400 AC104506.1-201ENST00000609247 429 ntBASIC15.12■□□□□ 0.01
RB1P06400 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC15.12■□□□□ 0.01
RB1P06400 AP000769.1-203ENST00000637245 208 ntBASIC15.12■□□□□ 0.01
RB1P06400 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms